NSs

Euk-Vir

Itaporanga_virus

NSs__YP_010086095__Itaporanga_virus__629735

Identity

83.6 mean pLDDT

Orthornavirae› Negarnaviricota› Bunyaviricetes› Hareavirales› Phenuiviridae› Phlebovirus› Itaporanga_virus

TaxID: 629735

View cluster (55 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 90-260

PDB

Domain cluster: rep: nonstructural_protein__YP_009141016__Bhanja_virus__1213620__D62-228

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF11073.14 best	NSs	40.6	3.00e-10	90.6%	62.3%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3rzeA01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.61	46.0	3.97e-01	77.8%	97.4%
3lmfA00	1.20.1270.360	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.55	34.0	4.07e-01	87.1%	95.4%
4dmvA01	1.20.58.1190	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.55	28.0	3.71e-01	86.0%	95.3%
2bnlC00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.54	32.0	3.52e-01	87.1%	70.9%
2w9zA01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.52	36.0	3.97e-01	93.6%	88.7%
2gz4A00	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.51	40.0	3.88e-01	94.2%	72.0%
1siqA03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.51	37.0	3.84e-01	88.3%	81.9%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4822198	1183.1.1.1 ↗	alpha complex topology › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › NSs	0.91	67.0	7.73e-01	81.9%	100.0%
2323915	1183.1.1.1 ↗	alpha complex topology › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › NSs	0.89	80.0	8.21e-01	95.9%	95.8%
3721335	109.4.1.356 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans	0.53	38.0	2.83e-01	71.9%	89.3%
3723165	109.3.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat	0.52	30.0	3.00e-01	90.1%	52.2%
3988781	604.6.1.63 ↗	alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › DUF3169	0.52	30.0	3.34e-01	70.8%	71.1%
3361982	611.7.1.13 ↗	alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › PUB10_N	0.51	34.0	3.43e-01	87.7%	64.6%

D2 medium residues 5-74

PDB

Domain cluster: rep: nonstructural_protein__YP_009346037__Uriurana_virus__1055750__D4-72