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NTPase,_DNA_primase

Euk-Vir

Adoxophyes_honmai_entomopoxvirus_L

NTPase,_DNA_primase__YP_008003908__Adoxophyes_honmai_entomopoxvirus_L__1293540

Identity

Accession:
YP_008003908 ↗
Protein ID:
NTPase,_DNA_primase
Kingdom:
euk

Quality

72.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 350-439_442-451
PDB
D2 high residues 509-723
PDB
D3 medium residues 34-82_305-319
PDB
D4 medium residues 83-182_227-254
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2f4lA03 3.10.28.20 Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains 0.61 32.0 3.83e-01 85.9% 77.5%
3b8oA01 3.30.1890.10 Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like 0.56 41.0 3.49e-01 78.1% 80.5%
7ztbB01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.55 44.0 4.06e-01 84.4% 96.9%
2qlzA02 6.10.250.2960 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 20.0 2.52e-01 88.3% 52.3%
1rjjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 35.0 3.77e-01 78.1% 76.6%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.53 41.0 3.55e-01 82.8% 76.7%
2hj1A00 3.10.20.280 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like 0.53 26.0 3.20e-01 71.9% 74.0%
2mgzA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.50 32.0 3.60e-01 80.5% 86.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5000245 131.1.1.3 alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.61 50.0 3.39e-01 87.5% 67.6%
None 0.51 38.0 2.83e-01 75.8% 58.8%
3932224 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.51 37.0 2.84e-01 76.6% 53.9%
D5 medium residues 183-226_255-282
PDB
D6 medium residues 283-304_320-346
PDB