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NTPase,_DNA_primase
Euk-VirAdoxophyes_honmai_entomopoxvirus_L
NTPase,_DNA_primase__YP_008003908__Adoxophyes_honmai_entomopoxvirus_L__1293540
Identity
- Accession:
- YP_008003908 ↗
- Protein ID:
- NTPase,_DNA_primase
- Kingdom:
- euk
Quality
72.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Betaentomopoxvirus›
Adoxophyes_honmai_entomopoxvirus_'L'
TaxID: 1293540
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 350-439_442-451
Domain cluster:
rep: IMGVR_UViG_3300025131_006063-3300025131-Ga0209128_10025523__D43-131
D2
high
residues 509-723
Domain cluster:
rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
D3
medium
residues 34-82_305-319
D4
medium
residues 83-182_227-254
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f4lA03 | 3.10.28.20 | Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains | 0.61 | 32.0 | 3.83e-01 | 85.9% | 77.5% |
| 3b8oA01 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.56 | 41.0 | 3.49e-01 | 78.1% | 80.5% |
| 7ztbB01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.55 | 44.0 | 4.06e-01 | 84.4% | 96.9% |
| 2qlzA02 | 6.10.250.2960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 20.0 | 2.52e-01 | 88.3% | 52.3% |
| 1rjjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 35.0 | 3.77e-01 | 78.1% | 76.6% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.53 | 41.0 | 3.55e-01 | 82.8% | 76.7% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.53 | 26.0 | 3.20e-01 | 71.9% | 74.0% |
| 2mgzA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.50 | 32.0 | 3.60e-01 | 80.5% | 86.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5000245 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.61 | 50.0 | 3.39e-01 | 87.5% | 67.6% |
| None | — | 0.51 | 38.0 | 2.83e-01 | 75.8% | 58.8% | |
| 3932224 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.51 | 37.0 | 2.84e-01 | 76.6% | 53.9% |
D5
medium
residues 183-226_255-282
D6
medium
residues 283-304_320-346