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NTPase
Euk-VirEuropean_catfish_virus
NTPase__YP_006347603__European_catfish_virus__84739
Identity
- Accession:
- YP_006347603 ↗
- Protein ID:
- NTPase
- Kingdom:
- euk
Quality
72.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Ranavirus›
European_catfish_virus
TaxID: 84739
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 801-933
D2
medium
residues 64-307_543-587
Domain cluster:
rep: SWI_SNF2_family_helicase_protein__YP_009342180__Lymphocystis_disease_virus_Sa__1898060__D47-271_530-554
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00176.30 best | SNF2-rel_dom | 34.0 | 2.50e-08 | 64.0% | 56.6% |
| PF04851.22 | ResIII | 46.1 | 7.50e-12 | 55.7% | 84.8% |
D3
medium
residues 308-382
Domain cluster:
rep: SWI_SNF2_family_helicase__YP_009021162__Anopheles_minimus_iridovirus__1465751__D285-356
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ebiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 34.0 | 3.55e-01 | 86.7% | 68.2% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 39.0 | 4.25e-01 | 90.7% | 91.9% |
| 3g9kF01 | 3.60.20.40 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit | 0.51 | 41.0 | 3.31e-01 | 92.0% | 57.7% |
| 3b4qA00 | 1.10.1200.100 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › conserved protein domain from corynebacterium diphtheriae | 0.51 | 42.0 | 4.02e-01 | 92.0% | 78.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3735348 | 221.1.1.110 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ULD_2 | 0.54 | 33.0 | 3.21e-01 | 80.0% | 51.8% |
| 3519127 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.52 | 35.0 | 3.47e-01 | 70.7% | 86.3% |
D4
medium
residues 383-542
Domain cluster:
rep: OQ622096.1__WGH28569.1__13VV501A_gene0073__00071__D542-667
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00271.38 best | Helicase_C | 40.6 | 3.80e-10 | 70.6% | 61.8% |
D5
medium
residues 691-786