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NendoU
Euk-VirRat_coronavirus_Parker
NendoU__YP_009924381__Rat_coronavirus_Parker__502102
Identity
- Accession:
- YP_009924381 ↗
- Protein ID:
- NendoU
- Kingdom:
- euk
Quality
88.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Coronaviridae›
Betacoronavirus›
Rat_coronavirus_Parker
TaxID: 502102
Cluster
View cluster (23 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-60
Domain cluster:
rep: putative_coronavirus_nsp12__NP_839968__Porcine_epidemic_diarrhea_virus__28295__D1-51
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19219.6 best | CoV_NSP15_N | 79.1 | 3.10e-22 | 100.0% | 96.7% |
D2
high
residues 69-185
Domain cluster:
rep: NSP15__YP_001941188__Turkey_coronavirus__11152__D65-176
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19216.6 best | CoV_NSP15_M | 112.4 | 2.10e-32 | 95.7% | 93.2% |
D3
high
residues 228-371
Domain cluster:
rep: coronavirus_nsp12__NP_740632__Infectious_bronchitis_virus__11120__D198-335
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19215.6 best | CoV_NSP15_C | 210.6 | 1.60e-62 | 100.0% | 92.9% |