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Nia-Pro

Euk-Vir

Caladenia_virus_A

Nia-Pro__YP_006666645__Caladenia_virus_A__1198147

Identity

Accession:
YP_006666645 ↗
Protein ID:
Nia-Pro
Kingdom:
euk

Quality

75.3 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Poacevirus› Caladenia_virus_A

TaxID: 1198147

Cluster

View cluster (187 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-10_92-176_217-226
PDB
Domain cluster: rep: ORF1a__YP_009047079__Human_astrovirus_BF34__1518575__D522-618
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00863.26 best Peptidase_C4 42.2 8.30e-11 85.7% 32.8%
PF00548.27 Peptidase_C3 24.3 3.90e-05 74.3% 19.3%
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 52.0 6.12e-01 76.2% 90.5%
1lvbA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 76.0 7.58e-01 98.1% 95.4%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 58.0 5.97e-01 87.6% 78.2%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.79 61.0 6.12e-01 81.0% 89.7%
1zyoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 61.0 6.25e-01 87.6% 85.1%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 60.0 6.08e-01 81.0% 89.4%
3szeA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.77 66.0 4.59e-01 90.5% 65.3%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 61.0 5.96e-01 87.6% 76.5%
1p3cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 63.0 6.36e-01 88.6% 89.5%
2zgcA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 62.0 5.78e-01 87.6% 94.4%
4r8tB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 49.0 5.77e-01 80.0% 97.3%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 57.0 5.79e-01 81.0% 86.3%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 57.0 5.76e-01 81.9% 85.7%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.73 55.0 4.46e-01 81.0% 73.5%
2wv9A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.73 61.0 5.12e-01 89.5% 93.0%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.72 55.0 4.88e-01 81.0% 86.1%
1flmA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.72 54.0 5.14e-01 79.0% 95.1%
1lvoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 57.0 6.13e-01 92.4% 100.0%
1eq9A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 59.0 5.73e-01 88.6% 94.0%
4lk4A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 60.0 5.68e-01 90.5% 91.2%
2j5uA03 2.40.10.350 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 0.70 50.0 5.74e-01 74.3% 100.0%
4m9fA00 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.70 58.0 4.65e-01 88.6% 89.5%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 58.0 5.95e-01 86.7% 96.0%
2r0xA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 50.0 4.34e-01 74.3% 78.8%
3u28C00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.69 42.0 4.45e-01 85.7% 68.5%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.67 51.0 5.02e-01 80.0% 88.5%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 46.0 4.67e-01 76.2% 72.6%
2v3mA00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.64 39.0 4.16e-01 86.7% 69.1%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.63 46.0 4.53e-01 76.2% 79.3%
4rqyA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 50.0 4.76e-01 85.7% 86.2%
1n26A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 37.0 4.09e-01 80.0% 80.8%
2eqnA01 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.59 39.0 4.24e-01 88.6% 80.5%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 42.0 3.38e-01 80.0% 95.1%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.84e-01 76.2% 89.8%
2b3rA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 41.0 3.86e-01 78.1% 79.0%
2gtlN02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.53 40.0 3.42e-01 79.0% 72.4%
2z04B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 41.0 3.43e-01 87.6% 87.6%
1djxA03 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 40.0 3.77e-01 84.8% 82.4%
1wfmA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 38.0 3.47e-01 78.1% 87.0%
1kjqB03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.50 40.0 3.33e-01 87.6% 100.0%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3783834 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.83 67.0 4.92e-01 84.8% 93.3%
3611892 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 68.0 5.51e-01 90.5% 91.1%
3704634 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.80 66.0 4.78e-01 86.7% 95.5%
257 1.1.5.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C4 0.80 76.0 5.76e-01 100.0% 96.3%
5016520 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.80 68.0 5.13e-01 90.5% 93.6%
3601993 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.79 67.0 5.40e-01 90.5% 87.7%
3719164 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.79 68.0 5.45e-01 90.5% 90.5%
4620869 1.1.5.57 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 0.79 67.0 4.55e-01 90.5% 84.9%
2526961 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.77 65.0 4.98e-01 88.6% 85.1%
None — 0.77 65.0 5.01e-01 88.6% 86.6%
5063188 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.77 66.0 5.10e-01 90.5% 86.0%
1096110 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.77 65.0 5.01e-01 88.6% 87.0%
None — 0.77 65.0 5.03e-01 88.6% 86.9%
4561917 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 64.0 4.72e-01 87.6% 76.4%
3989070 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 64.0 4.91e-01 87.6% 90.4%
None — 0.77 65.0 4.99e-01 88.6% 87.0%
3969197 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.76 65.0 4.75e-01 90.5% 83.0%
1309427 1.1.5.13 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 0.76 65.0 4.81e-01 90.5% 79.8%
5023947 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.76 55.0 4.64e-01 83.8% 46.5%
3280223 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.76 61.0 4.82e-01 88.6% 44.6%
4387060 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 63.0 4.91e-01 88.6% 85.6%
None — 0.75 63.0 4.94e-01 88.6% 87.6%
4031177 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 62.0 4.85e-01 87.6% 84.6%
None — 0.75 59.0 5.01e-01 82.9% 89.8%
4247805 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.75 63.0 4.90e-01 88.6% 86.3%
3772106 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.75 69.0 5.28e-01 99.0% 96.0%
3364575 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.75 57.0 4.87e-01 80.0% 77.4%
3220497 1.1.17.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.75 61.0 4.71e-01 86.7% 84.5%
3783835 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 69.0 5.01e-01 99.0% 95.1%
3867774 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.74 69.0 4.31e-01 100.0% 79.4%
3694033 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.74 62.0 5.56e-01 88.6% 69.3%
3244773 1.1.5.49 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.73 61.0 4.51e-01 89.5% 90.8%
3599795 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.73 61.0 4.45e-01 90.5% 79.3%
3545090 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.73 68.0 5.17e-01 99.0% 96.4%
3403377 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 60.0 4.45e-01 88.6% 85.2%
3236373 1.1.5.49 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.71 60.0 4.42e-01 90.5% 91.5%
3212847 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.70 58.0 4.60e-01 87.6% 85.4%
3407383 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.70 59.0 4.35e-01 90.5% 93.4%
3403363 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.69 58.0 4.27e-01 90.5% 92.1%
4614564 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.68 57.0 4.58e-01 88.6% 49.7%
4969578 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 38.0 4.49e-01 88.6% 78.4%
4263415 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.68 41.0 4.46e-01 83.8% 71.1%
3786062 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.68 49.0 4.14e-01 75.2% 74.4%
3968865 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.67 46.0 4.86e-01 77.1% 77.9%
2869319 1.1.7.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.65 41.0 4.26e-01 83.8% 67.3%
3409540 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.65 54.0 4.12e-01 90.5% 93.1%
4947204 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.63 46.0 4.47e-01 77.1% 98.3%
3532116 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.62 50.0 3.95e-01 85.7% 88.8%
3606721 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.61 43.0 4.32e-01 72.4% 96.3%
3240407 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.58 34.0 3.99e-01 81.0% 85.7%
3627859 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.58 34.0 3.88e-01 81.0% 80.0%
3924375 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.57 33.0 3.79e-01 81.0% 80.0%
3925589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 34.0 4.08e-01 79.0% 91.4%
5038126 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.55 34.0 3.87e-01 80.0% 88.0%
3268160 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 38.0 4.10e-01 90.5% 86.7%
3987370 219.1.1.73 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF4300 0.54 39.0 3.03e-01 76.2% 63.7%
861 9.3.1.3 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C 0.53 40.0 3.77e-01 79.0% 96.1%
3217448 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 35.0 4.08e-01 81.0% 96.0%
4607738 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.53 37.0 3.70e-01 73.3% 79.1%
3882078 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.53 39.0 3.63e-01 78.1% 73.3%
4063634 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.52 36.0 3.46e-01 72.4% 67.7%
4668960 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 36.0 3.60e-01 72.4% 75.5%
4674170 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.52 36.0 3.52e-01 73.3% 72.5%
4400596 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.51 36.0 3.16e-01 73.3% 52.5%
D2 medium residues 11-91_177-205
PDB
Domain cluster: rep: NIa-VPg-Pro_protein__YP_002956094__Triticum_mosaic_virus__431317__D201-288_375-394
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1lvmA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.85 70.0 7.16e-01 86.4% 94.3%
2z9iC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 55.0 5.94e-01 71.8% 89.1%
3fanA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 48.0 5.76e-01 73.6% 98.6%
5hmaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 53.0 5.86e-01 72.7% 94.3%
4rqyA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 60.0 5.77e-01 87.3% 83.7%
3tvjB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 59.0 5.97e-01 86.4% 100.0%
2aiqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 59.0 5.84e-01 87.3% 99.1%
4lk4A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 50.0 5.30e-01 71.8% 100.0%
2zu2A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 50.0 5.33e-01 72.7% 86.7%
1ym0A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 58.0 5.77e-01 86.4% 100.0%
1p3cA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 58.0 5.81e-01 87.3% 99.1%
5y2dA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 56.0 5.48e-01 87.3% 80.0%
2ynaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 47.0 5.21e-01 71.8% 100.0%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 47.0 4.68e-01 100.0% 81.6%
2kvoA01 2.40.30.220 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 0.58 39.0 4.04e-01 70.0% 92.3%
3gr5A02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.55 27.0 3.30e-01 74.5% 73.5%
1uh9A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.55 48.0 4.31e-01 94.5% 92.6%
4b6eB01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 49.0 4.04e-01 99.1% 96.5%
1miqA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.53 45.0 4.09e-01 93.6% 92.1%
1dpjA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.53 45.0 4.06e-01 93.6% 91.6%
1smpI00 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.53 40.0 4.22e-01 98.2% 87.0%
4lrzE02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 33.0 3.53e-01 91.8% 73.4%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.51 37.0 3.16e-01 76.4% 59.1%
5dn6I00 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.50 31.0 3.58e-01 89.1% 88.0%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3404225 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.74 60.0 4.83e-01 87.3% 96.2%
3469125 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.73 55.0 5.17e-01 78.2% 72.3%
3545090 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.72 60.0 4.70e-01 88.2% 86.8%
4338510 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.72 58.0 4.59e-01 85.5% 87.0%
4683578 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.71 57.0 4.52e-01 86.4% 95.6%
134018 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.70 56.0 4.90e-01 85.5% 94.4%
3284172 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.69 57.0 4.61e-01 88.2% 89.3%
1099000 1.1.5.19 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C30 0.69 52.0 4.37e-01 80.0% 87.6%
4852372 1.1.5.19 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C30 0.67 52.0 4.28e-01 80.9% 85.9%
3943844 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.63 45.0 4.70e-01 97.3% 81.0%
5038876 1.1.13.2 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach 0.57 44.0 4.81e-01 91.8% 100.0%
4883825 1.1.13.20 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 0.55 43.0 4.63e-01 96.4% 100.0%
4221193 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.54 46.0 3.30e-01 93.6% 43.4%
4464688 884.1.1.1 ↗ a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C 0.53 31.0 3.35e-01 92.7% 67.0%
4012905 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.51 33.0 3.67e-01 90.9% 85.9%