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Nib
Euk-VirCucurbit_vein_banding_virus
Nib__YP_009389258__Cucurbit_vein_banding_virus__2005044
Identity
- Accession:
- YP_009389258 ↗
- Protein ID:
- Nib
- Kingdom:
- euk
Quality
88.8
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Cucurbit_vein_banding_virus
TaxID: 2005044
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-58_404-490
Domain cluster:
rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488
D2
medium
residues 15-34_68-84_122-226_290-314
Domain cluster:
rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 74.7 | 8.80e-21 | 83.8% | 29.1% |
D3
medium
residues 85-121_253-289
Domain cluster:
rep: NIb_protein__YP_006423993__Chilli_ringspot_virus__414528__D83-109_251-288
D4
medium
residues 227-252_315-394
Domain cluster:
rep: NIb_segment__YP_008992252__Zucchini_tigre_mosaic_virus__1406816__D219-250_339-356_384-408
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 51.6 | 8.90e-14 | 87.7% | 17.8% |