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Nonstructural_protein_nsP4

Euk-Vir

Semliki_Forest_virus

Nonstructural_protein_nsP4__NP_740668__Semliki_Forest_virus__11033

Identity

Accession:
NP_740668 ↗
Protein ID:
Nonstructural_protein_nsP4
Kingdom:
euk

Quality

80.5 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Togaviridae› Alphavirus› Semliki_Forest_virus

TaxID: 11033

Cluster

View cluster (32 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-101
PDB
Domain cluster: rep: nonstructural_protein_nsP4__NP_740690__Mayaro_virus__59301__D37-123
D2 medium residues 110-136_175-204_507-614
PDB
Domain cluster: rep: replication_protein_2a__YP_006576519__Amazon_lily_mild_mottle_virus__1195163__D529-657
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00978.27 best RdRP_2 41.8 9.70e-11 56.4% 21.1%
D3 medium residues 221-266_380-408
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3905031 101.1.1.76 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.50 35.0 3.04e-01 77.3% 47.8%
D4 medium residues 267-294_306-337_409-434
PDB
Domain cluster: rep: nsp4_nonstructural_protein_-putative_start-_putative__NP_740669__Sindbis_virus__11034__D271-320_413-429
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00978.27 best RdRP_2 40.3 2.80e-10 96.5% 17.5%
D5 medium residues 338-379_435-506
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009345057__Xinzhou_nematode_virus_7__1923775__D238-258_337-401
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00978.27 best RdRP_2 64.2 1.50e-17 64.0% 15.0%
PF00978.27 RdRP_2 28.3 1.20e-06 39.5% 9.6%