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Nsp2
Euk-VirMobuck_virus
Nsp2__YP_008719910__Mobuck_virus__1408137
Identity
- Accession:
- YP_008719910 ↗
- Protein ID:
- Nsp2
- Kingdom:
- euk
Quality
60.2
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Resentoviricetes›
Reovirales›
Sedoreoviridae›
Orbivirus›
Mobuck_virus
TaxID: 1408137
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-145
Domain cluster:
rep: viral_inclusion_body_protein__YP_009158888__Wad_Medani_virus__40067__D17-130
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04514.20 best | BTV_NS2 | 194.9 | 4.00e-57 | 100.0% | 33.4% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1azpA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 23.0 | 3.03e-01 | 96.8% | 72.7% |
| 2zxrA01 | 2.40.50.460 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 28.0 | 2.64e-01 | 92.8% | 38.6% |
| 1fmbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.50 | 32.0 | 3.49e-01 | 80.0% | 76.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1058 | 703.1.1.1 ↗ | beta sandwiches › BTV NS2-like ssRNA-binding domain (N-terminal half of Pfam 04514) › BTV NS2-like ssRNA-binding domain (N-terminal half of Pfam 04514) › BTV NS2-like ssRNA-binding domain (N-terminal half of Pfam 04514) › BTV_NS2 | 0.93 | 90.0 | 8.28e-01 | 100.0% | 81.7% |
| 3176771 | 7516.1.1.7 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › UDPGP | 0.53 | 41.0 | 2.93e-01 | 82.4% | 81.3% |
| 3704885 | 3100.1.1.0 ↗ | extended segments › Synaptobrevin › Synaptobrevin › Synaptobrevin | 0.51 | 40.0 | 3.37e-01 | 82.4% | 76.2% |
| 3282850 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.51 | 37.0 | 3.67e-01 | 94.4% | 72.3% |
| 4 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.50 | 32.0 | 3.50e-01 | 80.0% | 76.9% |
D2
medium
residues 364-448