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ODV-E27

Euk-Vir

Perigonia_lusca_single_nucleopolyhedrovirus

ODV-E27__YP_009165614__Perigonia_lusca_single_nucleopolyhedrovirus__1675865

Identity

Accession:: YP_009165614 ↗
Protein ID:: ODV-E27
Kingdom:: euk

Quality

72.3 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Perigonia_lusca_single_nucleopolyhedrovirus

TaxID: 1675865

Cluster

View cluster (46 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 55-153

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05314.17 best	Baculo_ODV-E27	162.0	2.50e-47	100.0%	36.1%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1qwyA01	2.40.50.290	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.59	23.0	2.89e-01	70.7%	54.8%
1nnhA00	3.30.930.10	Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2	0.59	51.0	3.67e-01	97.0%	84.3%
5by3A01	3.30.379.10	Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like	0.56	39.0	3.65e-01	71.7%	65.6%
4l63A00	3.40.390.10	Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain)	0.56	45.0	3.37e-01	86.9%	39.0%
3gwmA00	3.90.470.20	Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain	0.53	40.0	3.67e-01	79.8%	79.8%
4l22A02	3.40.50.2000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B;	0.52	45.0	3.24e-01	100.0%	97.9%
2qcuB01	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.52	35.0	2.75e-01	70.7%	82.5%
4p02B02	3.30.379.20	Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 ›	0.51	36.0	3.42e-01	73.7%	63.9%
6ks6Z02	3.30.260.10	Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain	0.51	37.0	3.62e-01	88.9%	71.0%

ECOD (17)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4223692	2498.1.1.58 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF2201_N	0.67	42.0	3.49e-01	77.8%	36.5%
4937224	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.67	45.0	3.68e-01	73.7%	37.7%
5057982	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.66	45.0	3.59e-01	78.8%	34.9%
3936153	2498.1.1.39 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like	0.62	56.0	4.88e-01	100.0%	97.3%
5050812	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.62	44.0	3.23e-01	73.7%	54.9%
3281177	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.60	43.0	3.50e-01	80.8%	40.0%
5046934	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.60	41.0	3.76e-01	84.8%	53.1%
3485197	2498.1.1.39 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like	0.58	51.0	4.33e-01	97.0%	67.5%
3272315	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.58	47.0	3.85e-01	87.9%	60.6%
3939832	2006.1.6.39 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Mat89Bb	0.57	43.0	3.24e-01	79.8%	84.5%
3803299	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.54	40.0	3.44e-01	77.8%	83.7%
3704399	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.53	38.0	3.26e-01	75.8%	81.8%
3980571	4334.1.1.1 ↗	beta complex topology › Inserted beta sandwich domain in Dac-like proteins › Inserted beta sandwich domain in Dac-like proteins › Inserted beta sandwich domain in Dac-like proteins › Peptidase_S13	0.52	33.0	3.54e-01	81.8%	77.5%
3705371	2004.1.1.500 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5, AAA_6	0.51	43.0	3.50e-01	94.9%	98.0%
1693521	4334.1.1.1 ↗	beta complex topology › Inserted beta sandwich domain in Dac-like proteins › Inserted beta sandwich domain in Dac-like proteins › Inserted beta sandwich domain in Dac-like proteins › Peptidase_S13	0.51	32.0	3.44e-01	89.9%	72.9%
4180037	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.51	40.0	3.94e-01	83.8%	95.2%
3588485	268.2.1.1 ↗	a+b two layers › Sterol carrier protein-like › LytR-Cps2A-Psr (LCP) enzymes › LytR-Cps2A-Psr (LCP) enzymes › LytR_cpsA_psr	0.50	39.0	3.00e-01	84.8%	59.2%

D2 medium residues 208-276

PDB

Domain cluster: rep: odv-e27__YP_008378228__Hemileuca_sp._nucleopolyhedrovirus__1367203__D221-283

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05314.17 best	Baculo_ODV-E27	94.6	8.60e-27	100.0%	24.6%