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ODV-E66
Euk-VirPerigonia_lusca_single_nucleopolyhedrovirus
ODV-E66__YP_009165734__Perigonia_lusca_single_nucleopolyhedrovirus__1675865
Identity
- Accession:
- YP_009165734 ↗
- Protein ID:
- ODV-E66
- Kingdom:
- euk
Quality
89.0
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Perigonia_lusca_single_nucleopolyhedrovirus
TaxID: 1675865
Cluster
View cluster (43 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 598-658
Domain cluster:
rep: ODV-E66__NP_613227__Mamestra_configurata_nucleopolyhedrovirus_A__207830__D605-665
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04850.20 best | Baculo_E66 | 49.2 | 5.00e-13 | 100.0% | 14.1% |
D2
medium
residues 34-99_139-154
Domain cluster:
rep: odv-e66__YP_008378232__Hemileuca_sp._nucleopolyhedrovirus__1367203__D57-134
D3
medium
residues 100-138_155-225
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vsmA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.98 | 95.0 | 6.35e-01 | 100.0% | 37.2% |
| 3ljcA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 32.0 | 3.10e-01 | 79.1% | 52.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1005529 | 109.2.1.27 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N | 0.98 | 95.0 | 6.65e-01 | 100.0% | 44.5% |
| 3679201 | 4015.1.1.0 ↗ | alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins | 0.58 | 44.0 | 3.25e-01 | 80.9% | 47.7% |
| 3390993 | 601.7.1.21 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › NICE-3 | 0.56 | 31.0 | 3.28e-01 | 80.0% | 61.1% |
| 3721653 | 109.12.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 › Vps8 | 0.54 | 44.0 | 3.85e-01 | 88.2% | 74.5% |
| 3515314 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 45.0 | 4.29e-01 | 100.0% | 100.0% |
| 4253382 | 150.3.1.4 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › IFN-gamma | 0.53 | 30.0 | 2.98e-01 | 79.1% | 50.8% |
| 3269963 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.52 | 32.0 | 3.08e-01 | 78.2% | 51.5% |
| 3716879 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 43.0 | 3.40e-01 | 92.7% | 74.3% |
| 3535354 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.51 | 31.0 | 2.73e-01 | 82.7% | 40.6% |
D4
medium
residues 226-379
Domain cluster:
rep: ODV-E66__YP_009345851__Mythimna_unipuncta_granulovirus_B__2169746__D245-372
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04850.20 best | Baculo_E66 | 272.0 | 1.30e-80 | 100.0% | 35.2% |
D5
medium
residues 380-588
Domain cluster:
rep: odv-e66b__YP_009112683__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D393-432_447-516_538-651
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04850.20 best | Baculo_E66 | 263.1 | 6.30e-78 | 100.0% | 47.2% |
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vsmA02 | 2.70.98.100 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Baculovirus E66 occlusion-derived virus envelope protein, domain 2 | 0.92 | 79.0 | 8.24e-01 | 87.1% | 96.4% |
| 2q1fA03 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.79 | 68.0 | 6.06e-01 | 88.5% | 74.0% |
| 1f1sA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.74 | 61.0 | 5.49e-01 | 85.2% | 77.1% |
| 1cb8A02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.74 | 61.0 | 5.71e-01 | 84.7% | 76.0% |
| 7r2xA02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.72 | 60.0 | 5.58e-01 | 87.1% | 74.7% |
| 1rwhA02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.71 | 64.0 | 5.84e-01 | 94.7% | 74.9% |
| 1x1iA02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.67 | 61.0 | 5.50e-01 | 94.7% | 75.1% |
| 5jmfA02 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.66 | 62.0 | 5.63e-01 | 99.5% | 79.7% |
| 3fcsA03 | 2.60.40.1510 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 | 0.66 | 33.0 | 4.03e-01 | 77.0% | 71.9% |
| 3bgaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.66 | 52.0 | 4.76e-01 | 82.3% | 91.1% |
| 6jhpA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.65 | 53.0 | 4.72e-01 | 85.6% | 81.1% |
| 3mi6A01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.65 | 53.0 | 4.65e-01 | 85.6% | 78.0% |
| 3ty1A00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.65 | 53.0 | 4.31e-01 | 86.1% | 72.1% |
| 2yfoA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.65 | 53.0 | 4.61e-01 | 85.6% | 84.4% |
| 2d73A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.64 | 53.0 | 4.75e-01 | 86.1% | 94.0% |
| 2xn1A01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.64 | 52.0 | 4.57e-01 | 85.6% | 78.1% |
| 3obaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.64 | 51.0 | 4.52e-01 | 82.3% | 84.3% |
| 1yq2A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.63 | 49.0 | 4.37e-01 | 80.9% | 88.7% |
| 3nreA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.63 | 50.0 | 4.49e-01 | 82.8% | 85.6% |
| 6secA03 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.62 | 49.0 | 4.37e-01 | 80.4% | 90.1% |
| 1snzB00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 49.0 | 4.15e-01 | 83.3% | 80.4% |
| 6f91A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 56.0 | 5.04e-01 | 97.6% | 85.6% |
| 7wffb01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 48.0 | 4.21e-01 | 81.3% | 79.1% |
| 1lf6A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.60 | 54.0 | 4.96e-01 | 97.6% | 91.9% |
| 7ufsA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.60 | 53.0 | 4.95e-01 | 95.2% | 85.1% |
| 2zxqA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 49.0 | 4.41e-01 | 88.5% | 87.6% |
| 3ecqA02 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 46.0 | 4.27e-01 | 87.6% | 87.6% |
| 2eabB01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.54 | 49.0 | 4.64e-01 | 96.7% | 81.9% |
| 4ufcA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.53 | 47.0 | 4.03e-01 | 97.1% | 59.3% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 24.0 | 3.39e-01 | 85.2% | 92.2% |
| 2k8qA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 28.0 | 3.41e-01 | 96.2% | 78.4% |
| 2rdyA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.51 | 46.0 | 3.78e-01 | 99.0% | 67.2% |
| 4je0B01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 30.0 | 3.44e-01 | 77.0% | 79.6% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1005530 | 12.3.1.11 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Baculo_E66 | 0.92 | 78.0 | 7.24e-01 | 86.1% | 74.1% |
| 4034340 | 12.3.1.5 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 | 0.75 | 63.0 | 5.76e-01 | 87.6% | 74.3% |
| 2015 | 12.3.1.5 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 | 0.69 | 62.0 | 5.72e-01 | 94.7% | 74.6% |
| 2426584 | 12.3.1.5 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 | 0.68 | 62.0 | 5.57e-01 | 94.7% | 74.9% |
| 5033471 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.68 | 25.0 | 3.46e-01 | 80.4% | 64.8% |
| 3181774 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.68 | 53.0 | 4.52e-01 | 81.3% | 80.0% |
| 4957801 | 12.3.1.40 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N | 0.67 | 50.0 | 5.06e-01 | 98.1% | 76.7% |
| 5047323 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.67 | 56.0 | 5.23e-01 | 88.0% | 92.2% |
| 4283763 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.66 | 52.0 | 4.66e-01 | 81.3% | 85.9% |
| 5035179 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.65 | 59.0 | 5.02e-01 | 98.1% | 95.0% |
| 4156637 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.65 | 54.0 | 4.98e-01 | 87.6% | 75.5% |
| 4073110 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.65 | 54.0 | 4.94e-01 | 87.6% | 75.2% |
| 4035911 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.65 | 53.0 | 4.92e-01 | 85.6% | 91.2% |
| 4880457 | 12.3.1.22 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N | 0.64 | 54.0 | 4.93e-01 | 88.0% | 93.7% |
| 4125417 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.64 | 53.0 | 4.87e-01 | 87.6% | 95.3% |
| 5082094 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.64 | 51.0 | 4.71e-01 | 83.3% | 83.0% |
| 4188370 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.64 | 53.0 | 4.84e-01 | 87.1% | 96.0% |
| 4138593 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.63 | 29.0 | 3.65e-01 | 80.9% | 68.1% |
| 4428765 | 12.3.1.15 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › AmyA-gluTrfs_C | 0.62 | 49.0 | 4.34e-01 | 81.8% | 80.0% |
| 139039 | 12.3.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N | 0.62 | 56.0 | 4.85e-01 | 97.1% | 79.0% |
| 1385068 | 12.3.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N | 0.62 | 56.0 | 4.85e-01 | 97.6% | 85.0% |
| 1710650 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.62 | 27.0 | 3.75e-01 | 80.9% | 81.4% |
| 3190914 | 12.3.1.12 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_transf_36 | 0.61 | 56.0 | 4.87e-01 | 97.6% | 80.6% |
| 3593043 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.61 | 56.0 | 3.68e-01 | 99.0% | 34.8% |
| 5076441 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.61 | 55.0 | 5.09e-01 | 96.7% | 85.0% |
| 2538976 | 12.3.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N | 0.61 | 55.0 | 4.73e-01 | 96.7% | 84.5% |
| 5057652 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.60 | 49.0 | 4.62e-01 | 84.7% | 84.8% |
| 4851652 | 12.3.1.12 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_transf_36 | 0.60 | 47.0 | 4.30e-01 | 82.8% | 73.0% |
| 4621250 | 12.3.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N | 0.60 | 53.0 | 4.59e-01 | 94.7% | 79.0% |
| 5015778 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.59 | 53.0 | 4.92e-01 | 97.1% | 84.2% |
| 4943345 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 29.0 | 4.02e-01 | 79.9% | 96.0% |
| 5046360 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.59 | 52.0 | 4.89e-01 | 93.8% | 88.0% |
| 5025792 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.59 | 26.0 | 3.39e-01 | 80.9% | 71.3% |
| 3785047 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.59 | 46.0 | 3.99e-01 | 81.3% | 96.5% |
| 4021982 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.58 | 54.0 | 4.70e-01 | 99.5% | 81.7% |
| 4989818 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.58 | 49.0 | 4.90e-01 | 97.6% | 86.4% |
| 3987265 | 12.3.1.29 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_3 | 0.56 | 47.0 | 4.24e-01 | 88.0% | 97.2% |
| 3040855 | 12.3.1.21 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 | 0.53 | 43.0 | 4.12e-01 | 83.7% | 90.8% |
| 5053021 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.52 | 21.0 | 3.22e-01 | 84.2% | 87.8% |
| 3502994 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.52 | 26.0 | 3.25e-01 | 81.8% | 74.6% |
| 3290350 | 12.3.1.40 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N | 0.52 | 44.0 | 4.60e-01 | 91.9% | 100.0% |
| 3988158 | 12.3.1.21 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 | 0.51 | 44.0 | 3.96e-01 | 92.8% | 97.6% |