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ODV-E66

Euk-Vir

Diatraea_saccharalis_granulovirus

ODV-E66__YP_009182229__Diatraea_saccharalis_granulovirus__1675862

Identity

Accession:
YP_009182229 ↗
Protein ID:
ODV-E66
Kingdom:
euk

Quality

82.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D2 high residues 445-668
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 290.6 2.80e-86 100.0% 50.9%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vsmA02 2.70.98.100 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Baculovirus E66 occlusion-derived virus envelope protein, domain 2 0.98 80.0 8.71e-01 83.0% 99.0%
2q1fA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.82 79.0 7.27e-01 100.0% 91.7%
1hn0A03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.80 76.0 6.99e-01 100.0% 89.3%
1rwhA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.79 76.0 7.04e-01 100.0% 91.5%
1cb8A02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.78 74.0 7.16e-01 99.6% 94.3%
1x1iA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.77 73.0 6.79e-01 100.0% 91.6%
7r2xA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.75 71.0 6.80e-01 100.0% 92.2%
5jmfA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.65 62.0 5.75e-01 100.0% 87.5%
6gh3A01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.62 56.0 4.92e-01 97.3% 89.2%
2joxA00 2.60.40.4240 Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill 0.62 25.0 3.61e-01 98.2% 79.2%
1h54B01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.60 55.0 5.13e-01 96.9% 95.2%
1lurA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 55.0 4.82e-01 99.1% 95.7%
3wirA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.59 54.0 5.17e-01 97.3% 96.5%
2d73A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 55.0 5.10e-01 100.0% 96.1%
8owfA01 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 28.0 3.85e-01 71.9% 87.4%
4ktpA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.59 54.0 5.22e-01 97.3% 93.6%
3blcA00 2.70.98.90 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.58 53.0 4.97e-01 100.0% 85.4%
1d6uA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.57 52.0 4.31e-01 100.0% 95.1%
1a2vA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.57 52.0 4.22e-01 100.0% 88.6%
1ksiA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.57 52.0 4.24e-01 100.0% 93.5%
3w7tA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.56 48.0 4.75e-01 98.7% 87.1%
3kptA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 27.0 3.29e-01 88.4% 74.5%
1swgC00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.53 23.0 2.95e-01 88.8% 68.3%
4igbB02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 26.0 3.22e-01 86.6% 72.7%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1005530 12.3.1.11 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Baculo_E66 0.98 96.0 9.25e-01 100.0% 92.3%
2016 12.3.1.5 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 0.79 76.0 7.03e-01 100.0% 91.2%
2426584 12.3.1.5 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 0.78 74.0 6.87e-01 100.0% 91.3%
4035992 12.3.1.14 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III 0.67 63.0 6.05e-01 99.1% 94.0%
4258822 12.3.1.61 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PF25837 0.63 55.0 5.62e-01 99.1% 94.5%
3989339 12.3.1.14 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III 0.62 58.0 5.42e-01 100.0% 82.2%
4507201 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.61 50.0 5.06e-01 97.8% 85.8%
4668731 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.61 56.0 4.75e-01 99.1% 100.0%
4046546 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.61 56.0 5.07e-01 98.2% 91.8%
3955953 12.3.1.13 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.60 56.0 5.22e-01 100.0% 92.1%
3809272 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.60 55.0 5.05e-01 99.1% 88.8%
3393139 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.60 55.0 4.68e-01 99.1% 98.9%
4284296 12.3.1.22 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N 0.60 56.0 5.45e-01 100.0% 91.4%
1942596 12.3.1.22 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N 0.60 56.0 5.40e-01 100.0% 93.2%
2163580 12.3.1.22 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N 0.59 55.0 5.19e-01 100.0% 93.3%
42430 12.3.1.15 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › AmyA-gluTrfs_C 0.59 54.0 5.24e-01 98.2% 90.5%
3166311 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.59 55.0 4.74e-01 99.1% 93.7%
3621507 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.59 54.0 4.64e-01 98.7% 98.6%
3944715 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.59 54.0 4.64e-01 98.7% 100.0%
2795822 12.3.1.8 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N 0.59 53.0 5.23e-01 97.3% 97.5%
2082647 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.58 54.0 5.27e-01 100.0% 93.9%
3932406 12.3.1.13 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.58 53.0 4.73e-01 97.8% 91.7%
4197587 12.3.1.8 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N 0.58 53.0 5.09e-01 97.3% 99.6%
4554156 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.58 53.0 5.08e-01 100.0% 90.0%
3943954 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.58 53.0 4.96e-01 98.7% 95.6%
169754 12.3.1.2 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid 0.58 53.0 4.28e-01 100.0% 91.1%
4208434 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.57 53.0 4.82e-01 100.0% 82.4%
5044412 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.57 52.0 5.03e-01 100.0% 89.8%
3632840 12.3.1.2 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid 0.57 52.0 4.42e-01 100.0% 93.7%
3971848 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.55 47.0 4.86e-01 97.3% 96.7%
D3 medium residues 336-444
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 178.3 3.40e-52 100.0% 25.1%
D4 medium residues 669-761
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 41.5 1.10e-10 98.9% 23.0%
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vsmA03 2.60.40.4340 Mainly Beta › Sandwich › Immunoglobulin-like › 0.96 91.0 9.06e-01 97.8% 100.0%
1e2tA02 3.30.1120.150 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.67 36.0 3.81e-01 95.7% 58.1%
3witA00 2.20.220.20 Mainly Beta › Single Sheet › Glycosyl hydrolase fold › 0.67 38.0 4.42e-01 98.9% 79.7%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 42.0 3.80e-01 97.8% 48.0%
3kvpA00 6.20.140.10 Special › Other non-globular › Immunoglobulin-like › 0.63 30.0 4.24e-01 82.8% 97.7%
3amkA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 48.0 4.77e-01 83.9% 99.0%
2z1kA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 48.0 5.00e-01 82.8% 92.9%
3vm7A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 47.0 4.66e-01 82.8% 82.7%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 39.0 4.14e-01 82.8% 77.1%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.58 52.0 3.70e-01 100.0% 78.3%
5do8B03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 44.0 4.76e-01 81.7% 97.4%
3obaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 46.0 3.24e-01 87.1% 85.7%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 50.0 3.54e-01 100.0% 95.9%
3d33A00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 3.98e-01 83.9% 73.4%
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.55 48.0 3.83e-01 100.0% 89.4%
2qmlA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 48.0 3.86e-01 100.0% 90.7%
5f7uA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.54 47.0 3.64e-01 100.0% 88.5%
1jovA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 46.0 3.33e-01 93.5% 91.1%
2ovsA00 2.40.128.380 Mainly Beta › Beta Barrel › Lipocalin › T3SS negative regulator GrlR 0.54 41.0 3.84e-01 80.6% 80.5%
3eeeA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.53 44.0 3.61e-01 94.6% 53.7%
2xvlA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.53 46.0 3.54e-01 100.0% 88.0%
3g7gH00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.53 43.0 3.71e-01 89.2% 82.9%
4ekjA01 2.60.40.1500 Mainly Beta › Sandwich › Immunoglobulin-like › Glycosyl hydrolase domain; family 39 0.51 42.0 3.67e-01 93.5% 94.2%
2rioA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 36.0 3.85e-01 82.8% 84.1%
4mxtA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.51 46.0 3.63e-01 97.8% 89.8%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1005531 12.2.1.2 beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Baculo_E66 0.96 93.0 9.17e-01 100.0% 100.0%
4946049 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.69 47.0 5.03e-01 93.5% 80.0%
3617898 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.66 46.0 3.91e-01 97.8% 46.2%
4234211 3111.1.1.0 beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.64 41.0 4.28e-01 73.1% 70.6%
5025492 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.63 58.0 4.31e-01 100.0% 82.2%
4957570 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.63 42.0 3.71e-01 91.4% 47.4%
4034422 3425.2.1.3 a+b three layers › Two-component system yycF/yycG regulatory protein yycH-like › YycH C-terminal domain › YycH C-terminal domain › PF29809 0.62 47.0 3.47e-01 100.0% 30.6%
1974 12.1.1.7 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amyl_C 0.62 42.0 4.91e-01 80.6% 97.0%
4079675 4959.1.1.1 a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 0.62 33.0 3.11e-01 76.3% 45.0%
3210934 77.3.1.7 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF31062 0.62 48.0 4.61e-01 88.2% 72.4%
4962769 12.3.1.77 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PF25978 0.61 54.0 3.89e-01 96.8% 75.8%
5008026 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.61 42.0 3.39e-01 82.8% 37.7%
3666577 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.61 43.0 4.26e-01 81.7% 68.7%
3741207 12.1.1.14 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C 0.61 46.0 4.89e-01 81.7% 92.5%
3739851 12.1.1.14 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C 0.60 47.0 4.86e-01 82.8% 95.3%
3744768 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.60 53.0 4.88e-01 97.8% 86.7%
3278054 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.60 44.0 3.08e-01 83.9% 25.8%
3256681 77.3.1.0 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.59 45.0 2.98e-01 89.2% 20.6%
3931300 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.59 42.0 4.29e-01 92.5% 76.7%
3839745 319.3.1.1 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN 0.59 46.0 4.50e-01 82.8% 100.0%
4943631 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.57 50.0 3.60e-01 100.0% 80.7%
3056895 71.1.1.7 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_2 0.55 49.0 3.87e-01 97.8% 90.0%
4243623 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.55 47.0 3.78e-01 100.0% 92.0%
3731217 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.54 45.0 2.95e-01 92.5% 35.6%
3289559 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.52 41.0 2.85e-01 82.8% 27.3%
3241852 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.52 44.0 4.16e-01 95.7% 82.6%
3970994 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.52 40.0 2.75e-01 82.8% 62.4%
1107912 71.1.1.7 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_2 0.51 46.0 3.63e-01 97.8% 89.8%
3591252 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 41.0 2.84e-01 91.4% 99.2%