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ODV-E66

Euk-Vir

Plodia_interpunctella_granulovirus

ODV-E66__YP_009330164__Plodia_interpunctella_granulovirus__262175

Identity

Accession:: YP_009330164 ↗
Protein ID:: ODV-E66
Kingdom:: euk

Quality

84.0 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Plodia_interpunctella_granulovirus

TaxID: 262175

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 104-295

PDB

Domain cluster: rep: ODV-e66__YP_002854745__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467__D22-215

D2 medium residues 296-357

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	97.9	8.60e-28	100.0%	14.3%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3vsmA01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.97	92.0	5.52e-01	100.0%	17.9%
1rw9A01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.77	68.0	4.18e-01	100.0%	19.5%
1eguA02	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.77	67.0	4.13e-01	100.0%	19.4%
2wcoA01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.76	67.0	4.12e-01	100.0%	19.4%
1j0mA01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.75	65.0	4.06e-01	100.0%	21.3%
1cb8A01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.74	64.0	4.11e-01	100.0%	23.1%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1005529	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.97	92.0	5.69e-01	100.0%	21.4%
4225226	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.79	69.0	4.24e-01	100.0%	19.2%
59245	109.2.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid	0.77	68.0	4.17e-01	100.0%	19.5%
4474	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.76	66.0	4.10e-01	100.0%	19.4%
59271	109.2.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid	0.76	66.0	4.09e-01	100.0%	21.3%
4475	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.75	65.0	4.03e-01	100.0%	21.3%
398183	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.75	65.0	4.01e-01	100.0%	19.4%
4472	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.74	64.0	4.11e-01	100.0%	23.2%

D3 medium residues 358-438

PDB

Domain cluster: rep: ODV-E66B__YP_010086533__Spodoptera_exempta_nucleopolyhedrovirus__1242863__D304-403

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	141.6	4.60e-41	100.0%	18.7%

D4 medium residues 439-458_480-541_585-629

PDB

Domain cluster: rep: odv-e66b__YP_009112683__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D393-432_447-516_538-651

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	74.0	1.60e-20	50.4%	13.6%
PF04850.20	Baculo_E66	28.2	1.20e-06	38.6%	10.4%

D5 medium residues 459-479_542-584

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3vsmA02	2.70.98.100	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Baculovirus E66 occlusion-derived virus envelope protein, domain 2	0.97	93.0	6.32e-01	100.0%	65.6%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1005530	12.3.1.11 ↗	beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Baculo_E66	0.97	93.0	5.96e-01	100.0%	51.0%

D6 medium residues 630-725

PDB

Domain cluster: rep: odv-e66_protein__YP_007250454__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850__D599-694

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	34.4	1.50e-08	99.0%	23.3%