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ODV-E66

Euk-Vir

Operophtera_brumata_nucleopolyhedrovirus

ODV-E66__YP_009552679__Operophtera_brumata_nucleopolyhedrovirus__1046267

Identity

Accession:: YP_009552679 ↗
Protein ID:: ODV-E66
Kingdom:: euk

Quality

87.9 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Operophtera_brumata_nucleopolyhedrovirus

TaxID: 1046267

Cluster

View cluster (43 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 39-142

PDB

Domain cluster: rep: odv-e66__YP_008378232__Hemileuca_sp._nucleopolyhedrovirus__1367203__D57-134

CATH (20)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3vsmA01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.97	94.0	6.17e-01	100.0%	29.7%
1rw9A01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.76	71.0	4.70e-01	100.0%	32.0%
1j0mA01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.75	70.0	4.69e-01	100.0%	34.6%
1eguA02	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.73	66.0	4.46e-01	98.1%	45.7%
4xhcA01	1.50.10.10	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.68	53.0	3.68e-01	81.7%	64.6%
1cb8A01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.67	61.0	4.29e-01	99.0%	33.0%
4n4gA01	1.20.920.10	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like	0.63	40.0	3.96e-01	74.0%	60.4%
5pg1A00	1.20.920.10	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like	0.62	39.0	3.82e-01	74.0%	57.4%
1eqfA02	1.20.920.10	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like	0.59	41.0	3.84e-01	76.0%	58.4%
2xzeB00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.59	44.0	4.06e-01	79.8%	68.8%
6ljaA01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.58	49.0	3.43e-01	93.3%	81.7%
6wh0A01	1.10.437.10	Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like	0.58	48.0	4.30e-01	93.3%	92.1%
7ldgA00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.58	41.0	3.20e-01	73.1%	36.8%
1umpA01	1.50.10.20	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.57	45.0	3.09e-01	82.7%	47.0%
4dwlA00	1.20.1440.60	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence	0.57	41.0	4.13e-01	76.0%	75.9%
2afaA00	1.50.10.10	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.57	50.0	3.39e-01	99.0%	89.5%
2imsA00	1.10.437.10	Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like	0.56	46.0	4.04e-01	90.4%	88.3%
3zheA02	1.25.40.760	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.56	41.0	3.35e-01	76.9%	46.4%
3p9dG01	1.10.560.10	Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain	0.52	37.0	2.77e-01	74.0%	39.1%
4u7iA00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.50	39.0	4.14e-01	85.6%	95.7%

ECOD (14)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1005529	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.97	94.0	6.45e-01	100.0%	35.5%
59245	109.2.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid	0.77	70.0	4.69e-01	98.1%	45.5%
4225226	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.76	70.0	4.65e-01	99.0%	44.9%
59252	109.2.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid	0.74	67.0	4.49e-01	98.1%	45.8%
1548160	109.2.1.37 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Bac_rhamnosid6H	0.67	53.0	3.65e-01	83.7%	62.1%
5000552	604.12.1.0 ↗	alpha bundles › Spectrin repeat-like › MIT domain › MIT domain	0.64	44.0	4.48e-01	70.2%	78.0%
3668553	633.1.1.1 ↗	alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain	0.61	42.0	3.99e-01	79.8%	60.8%
3931889	633.1.1.1 ↗	alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain	0.59	37.0	3.63e-01	75.0%	57.4%
3177713	109.4.1.3109 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29499	0.57	42.0	3.34e-01	76.0%	38.0%
3422162	633.1.1.1 ↗	alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain	0.57	46.0	3.99e-01	88.5%	88.5%
3456067	633.1.1.1 ↗	alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain	0.56	40.0	3.89e-01	84.6%	64.2%
3836575	601.1.1.40 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › PGG	0.53	40.0	3.63e-01	80.8%	82.1%
3701929	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.52	44.0	3.45e-01	98.1%	75.7%
4002218	633.6.1.6 ↗	alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACAD9-ACADV_C	0.50	44.0	3.98e-01	96.2%	78.6%

D2 medium residues 143-241

PDB

Domain cluster: rep: ODV-E66__YP_009165734__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D100-138_155-225

D3 medium residues 242-397

PDB

Domain cluster: rep: ODV-E66__YP_009345851__Mythimna_unipuncta_granulovirus_B__2169746__D245-372

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	253.3	5.80e-75	100.0%	35.7%

D4 medium residues 398-420_462-573

PDB

Domain cluster: rep: Odv-e66__YP_006607780__Apocheima_cinerarium_nucleopolyhedrovirus__307461__D454-545

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	109.4	2.70e-31	83.7%	24.2%

D5 medium residues 421-461_574-663

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	31.5	1.20e-07	69.5%	22.8%
PF04850.20	Baculo_E66	51.8	8.50e-14	35.9%	9.7%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3bc9A01	2.60.40.1220	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.56	29.0	3.31e-01	94.7%	66.7%
2vsmA00	2.120.10.10	Mainly Beta › 6 Propeller › Neuraminidase ›	0.53	45.0	3.30e-01	97.7%	85.7%
2w5nA00	2.120.10.10	Mainly Beta › 6 Propeller › Neuraminidase ›	0.52	45.0	3.35e-01	96.9%	84.9%
1oygA01	2.115.10.20	Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43	0.52	43.0	3.12e-01	94.7%	88.9%