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ODV-E66

Euk-Vir

Lonomia_obliqua_multiple_nucleopolyhedrovirus

ODV-E66__YP_009666463__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394

Identity

Accession:
YP_009666463 ↗
Protein ID:
ODV-E66
Kingdom:
euk

Quality

86.0 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Lonomia_obliqua_multiple_nucleopolyhedrovirus

TaxID: 134394

Cluster

View cluster (43 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 65-222
PDB
Domain cluster: rep: ODV-e66__YP_002854745__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467__D22-215
D2 medium residues 265-428
PDB
Domain cluster: rep: ODV-E66__YP_009345851__Mythimna_unipuncta_granulovirus_B__2169746__D245-372
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 286.7 4.20e-85 100.0% 37.8%
D3 medium residues 450-624
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 195.1 2.70e-57 100.0% 38.2%
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vsmA02 2.70.98.100 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Baculovirus E66 occlusion-derived virus envelope protein, domain 2 0.99 86.0 8.24e-01 88.0% 80.2%
2q1fA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.78 67.0 5.63e-01 89.7% 59.9%
3rwxA02 2.40.128.350 Mainly Beta › Beta Barrel › Lipocalin › 0.74 29.0 3.33e-01 81.7% 48.5%
1f1sA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.73 61.0 5.13e-01 86.3% 62.2%
7r2xA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.72 61.0 5.29e-01 88.0% 64.2%
1cb8A02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.71 59.0 5.22e-01 86.3% 64.2%
1hn0A03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.70 64.0 5.38e-01 96.6% 64.8%
1txkA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.70 58.0 4.47e-01 86.9% 97.8%
1rwhA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.70 64.0 5.46e-01 97.1% 64.2%
3obaA05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.68 55.0 4.60e-01 84.6% 72.4%
1x1iA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.68 62.0 5.28e-01 97.1% 67.0%
6secA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.65 52.0 4.39e-01 83.4% 75.0%
2ciqA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 52.0 4.35e-01 84.6% 70.0%
3k25A00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 52.0 4.39e-01 85.7% 67.0%
3blcA00 2.70.98.90 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 53.0 4.53e-01 88.6% 65.0%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.64 33.0 3.92e-01 80.6% 71.7%
6w0pB01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.63 58.0 4.87e-01 100.0% 64.0%
6gh3A01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.62 57.0 4.64e-01 100.0% 93.2%
1h54B01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.61 50.0 4.32e-01 86.3% 60.2%
2d73A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 54.0 4.60e-01 96.6% 73.6%
1k1yB02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 49.0 4.32e-01 85.7% 88.5%
1lurA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 48.0 3.94e-01 85.1% 68.9%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.59 33.0 3.83e-01 80.6% 76.2%
4ufcA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.58 51.0 4.08e-01 99.4% 49.4%
1a2vA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.55 50.0 3.76e-01 99.4% 75.4%
3w7tA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.54 43.0 3.90e-01 83.4% 99.1%
1pzdA01 2.60.40.1480 Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain 0.53 33.0 3.49e-01 82.3% 68.6%
3zghA00 2.60.40.3400 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.99e-01 79.4% 79.1%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1005530 12.3.1.11 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Baculo_E66 0.99 84.0 7.28e-01 86.9% 61.5%
146366 5084.7.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Hypothetical bacterial outer membrane protein (BF2706) › Hypothetical bacterial outer membrane protein (BF2706) › Calycin_like 0.73 29.0 3.36e-01 82.9% 48.9%
2016 12.3.1.5 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 0.70 65.0 5.47e-01 97.1% 64.3%
1942596 12.3.1.22 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N 0.69 59.0 5.18e-01 89.7% 79.7%
2426584 12.3.1.5 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 0.68 63.0 5.33e-01 97.1% 66.5%
4258822 12.3.1.61 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PF25837 0.68 56.0 5.14e-01 85.7% 78.2%
4284296 12.3.1.22 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N 0.68 57.0 5.11e-01 89.1% 76.3%
4046546 12.3.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.68 55.0 4.57e-01 84.6% 72.8%
4154259 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.67 59.0 4.96e-01 94.9% 76.3%
2082647 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.66 55.0 4.88e-01 88.0% 77.3%
3809272 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.66 54.0 4.49e-01 85.7% 69.7%
4387316 12.3.1.8 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N 0.65 53.0 4.65e-01 85.7% 66.2%
4995046 12.3.1.15 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › AmyA-gluTrfs_C 0.65 50.0 4.18e-01 84.6% 47.4%
2774101 12.3.1.8 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N 0.65 52.0 4.54e-01 85.7% 56.3%
2795822 12.3.1.8 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N 0.64 52.0 4.70e-01 85.7% 64.6%
3285653 12.3.1.8 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N 0.64 59.0 4.95e-01 99.4% 62.8%
4620494 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.63 52.0 4.48e-01 88.6% 65.3%
3943954 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.63 51.0 4.37e-01 85.1% 69.1%
4944259 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.63 52.0 4.75e-01 88.6% 76.6%
3393139 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.63 51.0 4.00e-01 85.7% 95.3%
3839765 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.63 52.0 4.51e-01 88.6% 60.7%
4554156 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.62 51.0 4.53e-01 89.7% 71.5%
5014956 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 33.0 3.61e-01 82.3% 61.4%
3166311 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.61 49.0 3.98e-01 85.7% 68.7%
3621507 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.60 48.0 3.89e-01 85.7% 65.4%
5044412 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.60 50.0 4.45e-01 88.6% 73.9%
5053737 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.58 51.0 4.27e-01 95.4% 94.4%
3971848 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.58 49.0 4.59e-01 89.7% 99.0%
3394382 12.3.1.42 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 0.55 50.0 3.96e-01 99.4% 84.9%
3352673 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.52 38.0 3.08e-01 74.9% 53.7%
3531967 11.1.1.368 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Neurexophilin 0.52 35.0 3.82e-01 78.3% 81.4%
3183459 11.1.1.44 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 0.52 36.0 4.21e-01 94.9% 100.0%
4936904 4182.1.1.0 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.52 29.0 3.81e-01 77.1% 100.0%
4885978 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.51 37.0 3.00e-01 74.9% 51.5%
D4 medium residues 625-698
PDB
Domain cluster: rep: odv-e66_protein__YP_007250454__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850__D599-694
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 32.0 8.40e-08 98.7% 17.3%