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ODV-e66

Euk-Vir

Euproctis_pseudoconspersa_nucleopolyhedrovirus

ODV-e66__YP_002854745__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467

Identity

Accession:
YP_002854745 ↗
Protein ID:
ODV-e66
Kingdom:
euk

Quality

90.9 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Euproctis_pseudoconspersa_nucleopolyhedrovirus

TaxID: 307467

Cluster

View cluster (43 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-215
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vsmA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.98 96.0 7.59e-01 100.0% 56.5%
1rw9A01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.81 78.0 6.08e-01 100.0% 56.1%
1eguA02 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.79 76.0 5.93e-01 100.0% 55.9%
1j0mA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.79 76.0 5.97e-01 100.0% 55.4%
7r2xA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.78 74.0 5.95e-01 100.0% 62.3%
2wcoA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.77 73.0 5.77e-01 100.0% 69.5%
4wu0A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.73 64.0 5.13e-01 92.3% 76.7%
1cb8A01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.71 67.0 5.60e-01 100.0% 67.9%
1nc5A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.69 61.0 4.90e-01 94.3% 73.0%
3a0oA02 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.67 63.0 5.04e-01 100.0% 58.9%
6ry2A01 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.67 59.0 4.59e-01 92.8% 64.3%
8d0vA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.67 58.0 4.55e-01 91.2% 61.4%
4ozvA00 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.67 62.0 5.08e-01 97.9% 94.6%
4ce7B00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.67 60.0 4.90e-01 96.4% 75.9%
4cj0A02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.66 55.0 4.14e-01 87.1% 54.9%
4q88A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.66 59.0 4.80e-01 95.9% 75.1%
3cu7A11 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.65 57.0 4.73e-01 92.8% 70.2%
1qqfA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.64 57.0 5.03e-01 93.8% 68.8%
4xhcA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.64 56.0 4.65e-01 93.3% 62.5%
3kezA01 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.64 48.0 4.52e-01 77.8% 86.8%
3lewA01 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 53.0 4.46e-01 93.3% 80.7%
2ijqA00 1.10.3450.10 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like 0.57 32.0 3.64e-01 77.3% 71.7%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 40.0 4.14e-01 79.9% 80.6%
4ackB00 1.25.40.590 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU 0.52 38.0 4.25e-01 90.2% 95.4%
2wl8C00 1.20.120.900 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain 0.51 27.0 3.53e-01 98.5% 90.8%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1005529 109.2.1.27 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N 0.98 96.0 8.12e-01 100.0% 67.6%
59245 109.2.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.81 78.0 6.07e-01 100.0% 56.1%
4225226 109.2.1.27 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N 0.81 77.0 5.97e-01 100.0% 58.4%
4474 109.2.1.27 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N 0.80 76.0 5.97e-01 100.0% 56.1%
59252 109.2.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.79 76.0 5.94e-01 100.0% 56.1%
59271 109.2.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.79 76.0 5.99e-01 100.0% 55.4%
4475 109.2.1.27 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N 0.79 76.0 5.97e-01 100.0% 55.4%
398183 109.2.1.27 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N 0.77 73.0 5.74e-01 100.0% 69.5%
4472 109.2.1.27 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N 0.71 67.0 5.61e-01 100.0% 68.4%
4518169 109.2.1.23 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_88 0.67 60.0 4.80e-01 96.4% 71.6%
3561601 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 46.0 5.08e-01 88.1% 92.7%
3637048 109.4.1.1561 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_LAA1_C 0.64 53.0 4.87e-01 87.6% 74.8%
3225988 109.3.1.144 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF684 0.62 48.0 4.62e-01 80.4% 78.7%
4021444 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 47.0 3.93e-01 88.1% 47.8%
3383064 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 46.0 4.70e-01 78.4% 89.2%
3492775 109.4.1.95 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.60 54.0 4.13e-01 96.9% 48.1%
3498390 109.4.1.816 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RALGAPB_N 0.60 48.0 4.59e-01 85.1% 100.0%
3222587 109.4.1.235 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 0.58 47.0 4.23e-01 84.5% 70.6%
3920718 109.4.1.235 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 0.57 48.0 4.31e-01 88.1% 70.9%
3474104 109.4.1.557 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TTC7_N 0.57 45.0 4.75e-01 82.0% 100.0%
4142296 109.4.1.179 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nro1 0.56 45.0 4.85e-01 85.1% 98.8%
3972810 7011.1.1.6 ↗ alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain › Wzy_C 0.56 44.0 3.45e-01 83.0% 60.7%
3318639 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 45.0 4.30e-01 87.1% 85.3%
3482675 133.1.1.0 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) 0.51 37.0 3.68e-01 73.2% 93.5%
D2 high residues 306-584
PDB
Domain cluster: rep: odv-e66b__YP_009112683__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D393-432_447-516_538-651
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 392.4 3.50e-117 100.0% 63.1%
D3 high residues 587-648
PDB
Domain cluster: rep: ODV-E66__NP_613227__Mamestra_configurata_nucleopolyhedrovirus_A__207830__D605-665
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 53.7 2.20e-14 100.0% 14.3%
D4 medium residues 216-305
PDB
Domain cluster: rep: ODV-e66b__YP_003429368__Artogeia_rapae_granulovirus__362830__D334-361_374-417
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04850.20 best Baculo_E66 139.8 1.60e-40 100.0% 20.7%