ODV-e66b

Euk-Vir

Artogeia_rapae_granulovirus

ODV-e66b__YP_003429368__Artogeia_rapae_granulovirus__362830

Identity

81.7 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Betabaculovirus_arrapae

TaxID: 362830

View cluster (43 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 133-333_362-373

PDB

Domain cluster: rep: ODV-e66__YP_002854745__Euproctis_pseudoconspersa_nucleopolyhedrovirus__307467__D22-215

D2 medium residues 334-361_374-417

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	80.0	2.40e-22	100.0%	19.1%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3vsmA01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.98	95.0	5.78e-01	100.0%	24.2%
1eguA02	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.80	72.0	4.50e-01	100.0%	27.2%
2wcoA01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.80	72.0	4.49e-01	100.0%	29.6%
1rw9A01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.79	71.0	4.46e-01	100.0%	27.4%
1j0mA01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.78	69.0	4.38e-01	100.0%	28.0%
1cb8A01	1.50.10.100	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase	0.74	64.0	4.22e-01	100.0%	31.4%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1005529	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.98	95.0	5.98e-01	100.0%	29.0%
4225226	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.80	72.0	4.48e-01	100.0%	26.2%
4474	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.80	71.0	4.47e-01	100.0%	27.2%
59252	109.2.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid	0.79	71.0	4.45e-01	100.0%	27.2%
59245	109.2.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid	0.79	71.0	4.45e-01	100.0%	27.4%
398183	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.79	70.0	4.41e-01	100.0%	29.6%
4475	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.78	69.0	4.37e-01	100.0%	28.0%
4030865	109.2.1.27 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Lyase_8_N	0.78	69.0	4.29e-01	100.0%	27.1%

D3 medium residues 418-559

PDB

Domain cluster: rep: odv-e66b__YP_009112683__Agrotis_segetum_nucleopolyhedrovirus_B__1580580__D393-432_447-516_538-651

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	241.1	2.90e-71	100.0%	32.5%

D4 medium residues 560-667

PDB

Domain cluster: rep: odv-e66__YP_009513067__Agrotis_segetum_granulovirus__10464__D385-414_480-553

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	92.1	4.80e-26	100.0%	23.7%

D5 medium residues 668-762

PDB

Domain cluster: rep: odv-e66_protein__YP_007250454__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850__D599-694

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04850.20 best	Baculo_E66	49.4	4.50e-13	99.0%	21.2%