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OK018184.1__UDY80622.1__X__00229

Bact-Vir

OK018184.1__UDY80622.1__X__00229

Identity

Accession:
OK018184 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 204-264
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w7qB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.72 53.0 3.79e-01 93.4% 26.7%
7zqiA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.69 62.0 4.42e-01 100.0% 76.4%
4iiqC02 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.68 53.0 3.83e-01 85.2% 31.5%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.68 51.0 4.39e-01 91.8% 52.1%
1a6zA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.65 57.0 4.10e-01 100.0% 76.0%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 4.72e-01 90.2% 71.8%
2ganA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 46.0 3.55e-01 77.0% 83.3%
3oblA00 2.40.128.450 Mainly Beta › Beta Barrel › Lipocalin › 0.64 44.0 3.49e-01 72.1% 75.8%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 43.0 3.35e-01 75.4% 32.8%
4ffeX00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.62 46.0 3.52e-01 91.8% 32.7%
3fruA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.62 48.0 3.57e-01 88.5% 32.2%
6muwK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.62 42.0 2.92e-01 70.5% 43.1%
7b3aA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.62 51.0 3.90e-01 93.4% 74.5%
2mhgA00 2.20.130.30 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › Protein of unknown function DUF2782 0.61 51.0 4.80e-01 93.4% 78.7%
1u0tA02 2.60.200.30 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 0.61 43.0 3.34e-01 73.8% 71.5%
1zt4C01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.61 53.0 3.85e-01 100.0% 75.4%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.61 43.0 3.78e-01 73.8% 56.2%
4zbgA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 49.0 3.69e-01 91.8% 60.4%
2g18I00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.60 50.0 3.48e-01 100.0% 44.5%
3f4lA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 48.0 3.28e-01 91.8% 65.0%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.58 41.0 3.56e-01 75.4% 92.8%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 51.0 4.80e-01 100.0% 85.3%
3holA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.57 48.0 3.64e-01 100.0% 80.7%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.57 48.0 3.48e-01 93.4% 36.3%
6muwH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.56 43.0 3.00e-01 82.0% 40.8%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.56 45.0 4.13e-01 90.2% 79.3%
3v5nB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.55 45.0 3.27e-01 93.4% 65.8%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 46.0 3.32e-01 93.4% 31.7%
8adnN01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 45.0 3.29e-01 96.7% 60.7%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 3.94e-01 80.3% 83.3%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 48.0 3.46e-01 98.4% 40.7%
6qm7M00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 45.0 3.17e-01 95.1% 57.9%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.55 38.0 3.31e-01 72.1% 73.3%
2k5tA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 44.0 3.50e-01 90.2% 86.7%
2kcdA00 3.10.450.250 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor 0.54 47.0 3.79e-01 100.0% 50.0%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.54 37.0 3.05e-01 72.1% 66.7%
1bcrA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 47.0 3.15e-01 100.0% 98.8%
4ifaA01 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.53 45.0 3.00e-01 100.0% 45.2%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.53 34.0 3.48e-01 70.5% 68.4%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.52 40.0 3.76e-01 86.9% 79.7%
2xzmR01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 45.0 2.88e-01 100.0% 52.4%
3wucB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.45e-01 96.7% 77.4%
1iyxA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 37.0 3.03e-01 78.7% 95.2%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 39.0 2.69e-01 95.1% 72.1%
1dgmA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 43.0 2.79e-01 93.4% 35.9%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1841016 79.1.1.9 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer 0.91 85.0 5.49e-01 100.0% 29.8%
2417913 243.19.1.0 a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.90 84.0 4.96e-01 100.0% 17.7%
4948490 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.76 40.0 3.77e-01 72.1% 42.7%
373957 3091.1.1.1 a+b complex topology › Myosin VI cargo binding domain › Myosin VI cargo binding domain › Myosin VI cargo binding domain › Myosin-VI_CBD 0.73 57.0 4.45e-01 85.2% 90.7%
4999326 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.70 51.0 3.77e-01 77.0% 68.2%
3514479 210.1.2.0 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain 0.70 53.0 4.31e-01 80.3% 58.7%
3842370 233.1.1.0 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain 0.69 60.0 4.37e-01 98.4% 75.4%
None 0.69 60.0 3.22e-01 100.0% 47.2%
3917386 233.1.1.1 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I 0.69 60.0 4.34e-01 98.4% 75.4%
3965943 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.69 53.0 3.77e-01 93.4% 26.9%
4408002 5.1.3.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.67 45.0 3.13e-01 73.8% 20.5%
3236101 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.66 49.0 4.16e-01 78.7% 61.0%
4969694 4200.1.1.0 beta barrels › YmcC-like › YmcC-like › YmcC-like 0.66 55.0 4.02e-01 93.4% 35.9%
4133228 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.64 54.0 3.81e-01 93.4% 85.4%
4309203 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.63 53.0 3.79e-01 93.4% 87.2%
4355868 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.63 52.0 3.65e-01 91.8% 83.1%
1097232 3180.1.1.1 a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG 0.63 47.0 3.91e-01 91.8% 45.8%
4123780 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.63 52.0 3.65e-01 93.4% 29.0%
4250791 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.62 52.0 3.65e-01 93.4% 81.5%
3926676 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 47.0 3.63e-01 85.2% 42.0%
3724924 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.62 52.0 3.20e-01 93.4% 40.0%
1137418 3797.1.1.1 beta meanders › Uncharacterized protein PA5494 › Uncharacterized protein PA5494 › Uncharacterized protein PA5494 › DUF2782 0.61 51.0 4.80e-01 93.4% 78.7%
4545857 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.60 51.0 3.55e-01 93.4% 82.6%
4485546 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.60 50.0 3.58e-01 93.4% 85.9%
4285166 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.60 50.0 3.54e-01 93.4% 81.9%
3241614 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.60 42.0 3.27e-01 75.4% 40.7%
3433185 1094.1.1.0 a/b three-layered sandwiches › Polycomb protein Eed insertion domain › Polycomb protein Eed insertion domain › Polycomb protein Eed insertion domain 0.60 53.0 3.67e-01 100.0% 51.7%
2582168 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.59 52.0 3.90e-01 100.0% 47.5%
4572123 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.59 49.0 3.46e-01 93.4% 83.7%
3823787 220.1.1.74 beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.58 51.0 3.92e-01 100.0% 72.9%
5066039 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.57 48.0 2.83e-01 91.8% 22.9%
3313933 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.57 49.0 3.14e-01 100.0% 65.3%
3744672 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.56 48.0 3.56e-01 96.7% 86.7%
5039724 243.5.1.0 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.56 38.0 3.42e-01 73.8% 65.3%
4337890 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.56 46.0 3.23e-01 95.1% 61.4%
3995515 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 46.0 3.02e-01 98.4% 61.4%
4942586 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.55 47.0 3.97e-01 100.0% 79.1%
135704 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.55 40.0 3.32e-01 78.7% 79.5%
3497478 868.1.1.3 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.55 39.0 2.72e-01 75.4% 70.7%
3178905 708.1.2.6 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.55 41.0 3.19e-01 82.0% 73.0%
3554026 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.55 37.0 3.78e-01 70.5% 85.0%
4038568 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.55 45.0 3.26e-01 95.1% 82.1%
201018 243.13.1.1 a+b two layers › Cystatin-like › Uncharacterized protein SSP0047 › Uncharacterized protein SSP0047 › SAUGI 0.54 47.0 3.79e-01 100.0% 50.0%
3606892 218.1.1.0 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.54 38.0 3.14e-01 77.0% 87.2%
5013525 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.54 46.0 3.75e-01 100.0% 89.6%
3256904 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.54 45.0 3.60e-01 93.4% 49.6%
3643256 708.1.1.9 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › CG-1 0.53 43.0 3.45e-01 88.5% 46.4%
4030008 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 44.0 2.80e-01 93.4% 36.2%
3823735 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.52 41.0 3.75e-01 90.2% 71.8%
1544904 10.1.1.4 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.52 43.0 3.45e-01 96.7% 77.4%
3616007 4.1.1.233 beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.52 36.0 3.78e-01 90.2% 81.8%
3670358 218.1.1.2 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.52 39.0 3.43e-01 85.2% 58.0%
5025364 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.51 36.0 3.39e-01 73.8% 74.7%
3876887 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 42.0 2.40e-01 93.4% 16.2%
3575278 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.51 42.0 3.20e-01 93.4% 70.3%
4990182 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.51 41.0 3.88e-01 91.8% 90.7%
3190565 331.3.1.10 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL 0.51 42.0 3.23e-01 100.0% 53.0%
3915890 10.1.1.5 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin 0.51 44.0 3.69e-01 100.0% 77.3%
4076949 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 41.0 3.95e-01 90.2% 87.1%
4948218 243.6.1.12 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA 0.50 41.0 3.80e-01 98.4% 97.6%
4101190 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.50 35.0 3.38e-01 77.0% 72.0%
4995507 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.50 42.0 3.98e-01 95.1% 100.0%
D2 medium residues 265-318
PDB