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OK018184.1__UDY80631.1__X__00238
Bact-VirOK018184.1__UDY80631.1__X__00238
Identity
- Accession:
- OK018184 ↗
- Kingdom:
- phage
Quality
58.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Tequatrovirus›
Shigella_phage_CT01
TaxID: 2890957
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-79
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y9wA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 32.0 | 2.89e-01 | 100.0% | 35.6% |
| 2kigA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.58 | 41.0 | 3.30e-01 | 76.6% | 49.1% |
| 6qp7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 41.0 | 2.54e-01 | 80.5% | 34.4% |
| 1tzzB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 41.0 | 3.57e-01 | 89.6% | 52.9% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.53 | 46.0 | 3.95e-01 | 100.0% | 93.2% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 34.0 | 3.52e-01 | 76.6% | 70.3% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.51 | 37.0 | 3.66e-01 | 77.9% | 88.1% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.51 | 37.0 | 3.19e-01 | 80.5% | 68.9% |
| 1bf5A04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 38.0 | 3.44e-01 | 83.1% | 66.4% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3253472 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.59 | 37.0 | 3.60e-01 | 77.9% | 56.5% |
| 3687212 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 43.0 | 2.61e-01 | 80.5% | 23.8% |
| 5050503 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.55 | 47.0 | 2.98e-01 | 98.7% | 62.6% |
| 3194338 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.54 | 38.0 | 2.93e-01 | 76.6% | 50.5% |
| 3219334 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 46.0 | 3.60e-01 | 100.0% | 77.1% |
| 3989857 | 706.2.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.53 | 39.0 | 3.35e-01 | 83.1% | 52.9% |
| 3601659 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 45.0 | 3.74e-01 | 100.0% | 64.0% |
| 4988343 | 223.1.1.20 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › DUF3365 | 0.52 | 39.0 | 2.98e-01 | 79.2% | 81.7% |
| 5016404 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.52 | 38.0 | 3.80e-01 | 77.9% | 80.0% |
| 3517153 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 36.0 | 3.60e-01 | 93.5% | 70.0% |
| 3819309 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.51 | 36.0 | 3.50e-01 | 77.9% | 65.9% |
| 3965787 | 304.8.1.53 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th | 0.51 | 39.0 | 3.19e-01 | 83.1% | 71.3% |
| 3431362 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.51 | 38.0 | 2.93e-01 | 80.5% | 58.4% |
| 4951664 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 45.0 | 3.64e-01 | 100.0% | 92.7% |
| 3212636 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 42.0 | 2.59e-01 | 100.0% | 48.2% |
| 4243367 | 3561.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 | 0.50 | 40.0 | 2.52e-01 | 87.0% | 16.2% |
D2
medium
residues 81-140