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OK040171.1__UAV84512.1__PHB09_016__00016
Bact-VirOK040171.1__UAV84512.1__PHB09_016__00016
Identity
- Accession:
- OK040171 ↗
- Kingdom:
- phage
Quality
86.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Vandenendeviridae›
Dilongvirus›
Pseudomonas_phage_PHB09
TaxID: 2867265
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-50
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fvqA02 | 2.40.50.450 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 39.0 | 4.09e-01 | 100.0% | 68.2% |
| 3kw2A01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.62 | 41.0 | 3.67e-01 | 73.5% | 50.0% |
| 6ro0D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 42.0 | 3.29e-01 | 79.6% | 95.5% |
| 3f2bA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 38.0 | 3.08e-01 | 73.5% | 86.5% |
| 5fbhA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 35.0 | 2.36e-01 | 71.4% | 17.6% |
| 2dtcA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 39.0 | 3.14e-01 | 87.8% | 70.7% |
| 5tjjB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.50 | 43.0 | 2.97e-01 | 100.0% | 65.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4020059 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.66 | 36.0 | 2.52e-01 | 71.4% | 17.2% |
| 395 | 2.2.1.7 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Pertus-S4-tox | 0.57 | 42.0 | 3.28e-01 | 79.6% | 95.5% |
| 3347257 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 46.0 | 3.58e-01 | 91.8% | 89.6% |
| 5023176 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 39.0 | 3.36e-01 | 73.5% | 83.3% |
| 3210247 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 43.0 | 2.57e-01 | 98.0% | 11.4% |
| 3712993 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 39.0 | 3.44e-01 | 77.6% | 54.7% |
| 3599872 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.54 | 49.0 | 3.02e-01 | 100.0% | 28.9% |
| 4477850 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.54 | 40.0 | 3.22e-01 | 81.6% | 86.0% |
| 3776456 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.53 | 40.0 | 3.44e-01 | 98.0% | 50.0% |
| 4942967 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 44.0 | 3.31e-01 | 98.0% | 66.9% |
| 5046650 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.52 | 44.0 | 3.29e-01 | 100.0% | 65.9% |
| 3741896 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 44.0 | 2.68e-01 | 100.0% | 80.3% |
| 4680169 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.52 | 39.0 | 3.21e-01 | 89.8% | 83.8% |
| 4133217 | 10.1.1.55 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PL28 | 0.51 | 42.0 | 2.66e-01 | 91.8% | 42.6% |
| 3312418 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 43.0 | 2.71e-01 | 100.0% | 87.0% |
| 3421524 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 42.0 | 2.50e-01 | 93.9% | 26.8% |
| 5064368 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 38.0 | 3.03e-01 | 91.8% | 96.7% |