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OK040171.1__UAV84553.1__PHB09_057__00057

Bact-Vir

OK040171.1__UAV84553.1__PHB09_057__00057

Identity

Accession:
OK040171 ↗
Kingdom:
phage

Quality

83.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Dilongvirus› Pseudomonas_phage_PHB09

TaxID: 2867265

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 353-444
PDB
Domain cluster: rep: MW960037.1__QWY83581.1__X__00027__D159-241
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 47.0 4.47e-01 71.7% 98.2%
4nyqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 47.0 3.95e-01 72.8% 46.4%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 48.0 4.02e-01 76.1% 61.8%
4lmiB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 47.0 4.14e-01 75.0% 80.1%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 47.0 5.11e-01 76.1% 96.1%
1yq2A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.63 50.0 3.46e-01 84.8% 90.7%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 46.0 4.02e-01 79.3% 53.0%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.62 51.0 4.84e-01 91.3% 92.0%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.62 52.0 3.60e-01 92.4% 56.5%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 45.0 4.08e-01 75.0% 99.2%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 48.0 4.18e-01 89.1% 56.3%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.61 45.0 3.81e-01 77.2% 51.7%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 40.0 4.27e-01 79.3% 77.8%
1z24A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 46.0 3.69e-01 82.6% 92.1%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 38.0 4.16e-01 80.4% 83.1%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.58 43.0 3.65e-01 78.3% 55.3%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.58 36.0 3.37e-01 83.7% 49.6%
3loyA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 41.0 4.03e-01 75.0% 93.1%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 45.0 4.00e-01 84.8% 64.9%
5a67A00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.57 42.0 3.21e-01 77.2% 86.9%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 4.14e-01 83.7% 97.3%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 45.0 3.95e-01 89.1% 56.6%
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.56 46.0 3.39e-01 91.3% 83.1%
7odhL01 1.10.645.10 Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B 0.56 44.0 2.73e-01 85.9% 80.9%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.55 42.0 3.72e-01 85.9% 55.0%
3sxxC01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 4.01e-01 81.5% 95.1%
6serA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 43.0 3.23e-01 83.7% 50.0%
1ohfA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.54 41.0 3.60e-01 81.5% 68.1%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.54 43.0 3.51e-01 88.0% 52.7%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 44.0 3.87e-01 89.1% 60.0%
4ewfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.54 46.0 3.43e-01 100.0% 81.7%
1xn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 43.0 3.85e-01 89.1% 60.1%
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 41.0 2.99e-01 85.9% 38.4%
2rdyA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.53 47.0 3.15e-01 100.0% 69.8%
5jozB02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 3.52e-01 93.5% 65.8%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.53 38.0 3.37e-01 76.1% 60.4%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.52 43.0 3.70e-01 90.2% 63.3%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.50e-01 94.6% 54.8%
2nykA01 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.52 41.0 3.53e-01 85.9% 62.2%
4jpqA00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 3.11e-01 85.9% 66.2%
1cq3A00 2.60.240.10 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › Major secreted virus protein 0.51 39.0 3.07e-01 84.8% 76.3%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3974671 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.87 73.0 7.62e-01 88.0% 100.0%
3216442 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.73 44.0 3.32e-01 72.8% 26.2%
4010689 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.66 49.0 4.84e-01 78.3% 87.0%
4939146 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 56.0 3.73e-01 93.5% 54.9%
4354418 9.1.1.16 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.62 50.0 2.95e-01 85.9% 23.3%
3961706 4.1.1.161 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4178 0.62 42.0 4.80e-01 79.3% 100.0%
818 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.61 48.0 4.29e-01 89.1% 58.8%
4978599 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 53.0 3.51e-01 94.6% 42.7%
4953412 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.61 41.0 3.72e-01 79.3% 51.2%
1170462 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.59 37.0 4.37e-01 80.4% 96.7%
5036065 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 43.0 4.71e-01 78.3% 94.7%
1170463 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.59 40.0 4.06e-01 79.3% 71.4%
3642733 5.1.3.65 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.58 49.0 3.50e-01 95.7% 44.3%
5009761 331.3.1.7 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.58 48.0 4.13e-01 90.2% 71.0%
4942549 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 48.0 3.46e-01 95.7% 50.5%
3785596 216.1.1.2 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.56 44.0 3.65e-01 84.8% 49.7%
3324335 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.56 44.0 3.64e-01 87.0% 91.8%
3968112 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.56 43.0 3.59e-01 81.5% 50.0%
3812869 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.55 41.0 4.01e-01 79.3% 75.0%
5036836 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.54 40.0 3.09e-01 80.4% 33.0%
3837575 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.54 45.0 3.02e-01 92.4% 37.3%
4026173 10.1.1.21 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › 3keto-disac_hyd 0.53 45.0 3.54e-01 94.6% 60.0%
5060431 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.53 41.0 2.78e-01 85.9% 29.7%
3505038 220.1.1.159 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_met_RdRP 0.53 45.0 3.63e-01 93.5% 70.3%
5043752 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 45.0 3.34e-01 94.6% 46.9%
5026249 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.53 42.0 3.02e-01 88.0% 36.8%
4486484 2004.1.1.799 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_27, AAA_29 0.53 42.0 2.93e-01 88.0% 32.3%
3506414 12.3.1.42 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 0.53 47.0 3.56e-01 100.0% 80.0%
4991694 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 42.0 2.98e-01 89.1% 39.0%
3821429 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.51 41.0 3.47e-01 88.0% 93.1%
1140350 241.15.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.51 42.0 3.58e-01 90.2% 93.5%
3332798 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.50 40.0 3.34e-01 90.2% 60.6%
D2 high residues 478-538
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.69 50.0 3.96e-01 85.2% 36.6%
6accA01 2.60.120.960 Mainly Beta › Sandwich › Jelly Rolls › Spike glycoprotein, N-terminal domain 0.68 47.0 3.07e-01 72.1% 26.7%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 59.0 4.50e-01 100.0% 70.2%
8eg0B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 45.0 2.78e-01 70.5% 12.3%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.66 44.0 4.05e-01 70.5% 52.4%
2nlvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.65 52.0 4.30e-01 88.5% 81.2%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.64 52.0 3.97e-01 90.2% 61.0%
4qq1C03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.64 44.0 3.90e-01 86.9% 50.0%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.64 46.0 3.64e-01 86.9% 35.6%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.63 48.0 3.67e-01 86.9% 53.7%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.63 51.0 3.85e-01 90.2% 53.9%
4ktpB02 2.60.420.10 Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 0.63 45.0 4.13e-01 77.0% 95.1%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 54.0 4.19e-01 100.0% 72.1%
3mwxA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.61 53.0 3.35e-01 100.0% 78.0%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.60 49.0 3.07e-01 91.8% 27.8%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.60 51.0 3.65e-01 93.4% 41.6%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.60 48.0 3.58e-01 91.8% 40.9%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 42.0 3.63e-01 78.7% 84.3%
2htaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.58 48.0 3.21e-01 100.0% 83.5%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.58 47.0 3.48e-01 93.4% 40.7%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 49.0 2.98e-01 95.1% 26.1%
5hy7B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 47.0 2.83e-01 90.2% 20.6%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 43.0 2.77e-01 85.2% 35.7%
1dp4C02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 43.0 3.08e-01 85.2% 34.3%
1xkpC00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.57 43.0 3.44e-01 82.0% 73.8%
1fblA02 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.57 37.0 2.68e-01 78.7% 21.5%
3hkzG00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 44.0 3.70e-01 88.5% 85.0%
1p5tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 46.0 3.87e-01 91.8% 72.6%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 44.0 3.59e-01 86.9% 50.8%
3lp9A00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.56 43.0 2.97e-01 85.2% 94.7%
2durB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.28e-01 96.7% 83.4%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.56 47.0 4.40e-01 95.1% 91.0%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.55 42.0 3.45e-01 85.2% 78.3%
4gklA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 39.0 3.53e-01 75.4% 100.0%
1ekgA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.55 45.0 3.69e-01 93.4% 56.3%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 42.0 3.37e-01 86.9% 40.9%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 44.0 2.88e-01 98.4% 34.1%
1k3sA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 39.0 3.33e-01 80.3% 78.7%
2v7sA00 3.30.2030.20 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.53 39.0 2.94e-01 100.0% 29.6%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 42.0 2.80e-01 96.7% 37.5%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 44.0 3.57e-01 98.4% 89.4%
2zfdB00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.53 36.0 3.06e-01 73.8% 40.5%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.53 41.0 3.60e-01 90.2% 61.0%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.51 40.0 3.58e-01 88.5% 59.6%
3gd0A02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.50 37.0 3.17e-01 83.6% 52.7%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.50 42.0 2.95e-01 95.1% 82.4%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5011728 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.75 51.0 4.38e-01 70.5% 51.6%
5014277 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.71 49.0 4.39e-01 72.1% 57.6%
3577464 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.71 48.0 3.04e-01 70.5% 14.2%
5014685 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.70 48.0 4.70e-01 70.5% 66.2%
3600915 77.3.1.0 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.70 61.0 3.79e-01 100.0% 25.1%
3962450 9.27.1.0 ↗ beta barrels › Lipocalins/Streptavidin › LpqH › LpqH 0.70 62.0 5.20e-01 100.0% 80.0%
5076987 2004.1.1.308 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.70 52.0 3.25e-01 82.0% 15.2%
4991973 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 54.0 3.48e-01 83.6% 19.3%
3984091 3180.1.1.1 ↗ a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG 0.69 46.0 3.87e-01 78.7% 40.0%
3894207 3369.1.1.1 ↗ beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal 0.69 55.0 4.10e-01 88.5% 56.5%
3422937 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.68 44.0 4.50e-01 78.7% 68.3%
5033616 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.68 52.0 3.47e-01 85.2% 97.3%
3238997 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.68 55.0 4.32e-01 91.8% 48.1%
3459971 5084.5.3.9 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › PF28611 0.67 59.0 3.81e-01 100.0% 32.0%
5032559 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.67 52.0 4.62e-01 85.2% 57.8%
4000086 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.66 58.0 3.21e-01 100.0% 82.9%
5026277 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.66 47.0 4.83e-01 80.3% 78.3%
1503842 9.27.1.1 ↗ beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa 0.66 57.0 4.69e-01 100.0% 85.1%
3707133 12.3.1.19 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.64 53.0 3.72e-01 93.4% 65.2%
5039195 5.1.4.40 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.64 50.0 3.39e-01 83.6% 35.3%
4945114 4252.1.1.10 ↗ beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.64 50.0 3.53e-01 86.9% 47.0%
5063612 4252.1.1.10 ↗ beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.64 52.0 3.70e-01 91.8% 49.5%
7054 881.2.1.1 ↗ a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like › DUF3242 0.64 46.0 3.71e-01 86.9% 37.8%
3684031 7512.1.1.1 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDPGT 0.63 42.0 2.78e-01 77.0% 15.8%
3433124 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 48.0 2.97e-01 83.6% 35.0%
3419526 5.1.5.146 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_AT5G49610-like 0.63 45.0 2.83e-01 75.4% 13.8%
4436049 1190.1.1.1 ↗ a+b two layers › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › CsgF 0.63 41.0 3.56e-01 75.4% 41.0%
1567525 3842.1.1.1 ↗ a+b two layers › Uncharacterized protein Rv3902c › Uncharacterized protein Rv3902c › Uncharacterized protein Rv3902c › Imm61 0.63 53.0 3.87e-01 96.7% 58.3%
3520733 5.1.4.16 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.62 51.0 3.12e-01 91.8% 21.3%
2998372 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.62 46.0 4.83e-01 86.9% 92.5%
3222419 331.23.1.0 ↗ a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain 0.61 44.0 4.19e-01 85.2% 62.7%
3413293 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 47.0 2.93e-01 83.6% 22.3%
119302 3146.1.1.0 ↗ a+b complex topology › gH main domain › gH main domain › gH main domain 0.60 51.0 3.19e-01 93.4% 22.3%
3967100 2003.1.5.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.60 52.0 3.52e-01 100.0% 96.7%
5041468 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 46.0 2.84e-01 88.5% 49.3%
3698170 5.1.3.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.60 46.0 2.80e-01 83.6% 28.5%
3981185 241.1.1.25 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF27378 0.60 44.0 3.70e-01 82.0% 73.9%
4949514 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.59 44.0 2.74e-01 80.3% 71.7%
3588455 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.59 38.0 3.66e-01 77.0% 55.7%
3575893 3459.1.1.1 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.59 44.0 3.86e-01 86.9% 52.6%
4988758 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.59 45.0 3.88e-01 86.9% 94.3%
3474457 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.59 45.0 3.97e-01 85.2% 56.8%
4385734 5.1.4.567 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Helveticin_J 0.58 48.0 3.06e-01 93.4% 31.2%
3603015 205.1.1.0 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.57 45.0 2.83e-01 88.5% 28.2%
3484246 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.57 46.0 2.85e-01 90.2% 19.5%
4946341 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.57 46.0 3.12e-01 91.8% 46.5%
4935362 205.1.1.22 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 0.57 41.0 2.66e-01 82.0% 98.8%
3739528 5.1.3.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.56 43.0 3.02e-01 82.0% 35.1%
5791 295.1.1.6 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 0.56 44.0 3.60e-01 86.9% 51.3%
3222216 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 42.0 4.08e-01 83.6% 75.7%
3741169 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 43.0 2.86e-01 88.5% 45.7%
3707402 12.6.1.1 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_65C 0.55 43.0 4.05e-01 85.2% 94.7%
4955652 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 46.0 2.93e-01 100.0% 27.9%
3602505 3454.1.1.0 ↗ beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like 0.55 40.0 3.31e-01 78.7% 58.3%
3272453 6.1.1.7 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › CDtoxinA 0.55 35.0 2.82e-01 78.7% 29.6%
5036807 3111.1.1.0 ↗ beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.52 43.0 3.85e-01 98.4% 78.9%
4224331 11.1.1.53 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.50 40.0 3.12e-01 93.4% 74.5%
D3 high residues 700-756
PDB
Domain cluster: rep: OM471789.1__UMM62452.1__X__00001__D31-84
D4 medium residues 108-157
PDB
Domain cluster: rep: IMGVR_UViG_3300038673_000745-3300038673-Ga0416707_000196_74481_75365__D180-235
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wdjA00 3.90.1570.10 Alpha Beta › Alpha-Beta Complex › tt1808, chain A › tt1808, chain A 0.66 54.0 3.78e-01 98.0% 95.7%
2hlyA00 3.10.550.10 Alpha Beta › Roll › Atu2299-like › Hypothetical protein Atu2299 0.61 41.0 2.75e-01 70.0% 71.7%
1nubA01 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.60 40.0 3.46e-01 80.0% 41.5%
2b0uD02 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.58 38.0 3.51e-01 86.0% 47.2%
4jn3A01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.58 40.0 2.63e-01 72.0% 38.7%
1ju2A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 44.0 2.72e-01 90.0% 48.5%
6pzjA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 39.0 2.86e-01 74.0% 57.4%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.26e-01 72.0% 54.9%
1g5hA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.55 38.0 2.44e-01 76.0% 66.8%
2af6A01 3.30.70.3180 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 41.0 3.23e-01 92.0% 99.2%
3nybA01 1.10.1410.10 Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › 0.53 41.0 2.84e-01 94.0% 38.5%
1xhbA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 45.0 2.93e-01 100.0% 80.8%
3go5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 36.0 3.17e-01 74.0% 65.8%
2qpwA01 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.52 38.0 2.98e-01 84.0% 57.1%
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.50 33.0 3.47e-01 72.0% 87.2%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3897269 379.1.1.3 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.60 41.0 3.57e-01 82.0% 42.4%
3223744 379.1.1.0 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.59 39.0 3.39e-01 80.0% 39.8%
None — 0.59 39.0 2.16e-01 70.0% 26.8%
3363496 7528.1.1.1 ↗ a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_I 0.52 43.0 3.54e-01 94.0% 51.8%
1564928 5.1.4.19 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD 0.52 37.0 2.41e-01 84.0% 47.7%
3993240 4015.1.1.1 ↗ alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 0.51 35.0 2.33e-01 74.0% 16.4%
D5 medium residues 250-332
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.65 44.0 4.37e-01 90.4% 65.9%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.63 53.0 4.08e-01 91.6% 54.9%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 51.0 4.37e-01 90.4% 57.4%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.62 49.0 4.58e-01 85.5% 86.5%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.62 41.0 4.64e-01 90.4% 90.5%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 51.0 4.34e-01 90.4% 54.8%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 54.0 3.57e-01 97.6% 46.4%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.60 39.0 4.46e-01 79.5% 100.0%
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 51.0 3.91e-01 94.0% 52.1%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 52.0 3.51e-01 100.0% 56.8%
2v7sA00 3.30.2030.20 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.60 42.0 3.32e-01 89.2% 35.5%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 50.0 4.59e-01 94.0% 96.4%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.59 45.0 4.78e-01 92.8% 94.4%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.59 46.0 3.84e-01 85.5% 75.3%
4o9dA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 49.0 3.25e-01 98.8% 35.3%
3loyA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 48.0 4.53e-01 91.6% 86.1%
1q47A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 50.0 3.15e-01 98.8% 28.9%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 47.0 4.07e-01 91.6% 58.5%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 47.0 3.97e-01 92.8% 60.1%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 49.0 3.20e-01 100.0% 39.7%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 43.0 3.78e-01 81.9% 58.3%
2la7A01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.55 47.0 4.06e-01 92.8% 61.7%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 42.0 3.28e-01 84.3% 78.9%
7erlA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 43.0 3.39e-01 84.3% 87.7%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.53 42.0 4.00e-01 86.7% 76.0%
2a22B00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.53 39.0 3.04e-01 81.9% 90.6%
4wvmA04 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.52 44.0 3.40e-01 94.0% 89.2%
2m47A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 43.0 3.48e-01 96.4% 47.2%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3974671 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.82 75.0 7.47e-01 97.6% 98.8%
4033743 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.75 66.0 6.55e-01 94.0% 94.1%
4033339 520.1.1.2 ↗ beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related › PF27308 0.75 65.0 6.48e-01 92.8% 91.8%
4031359 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.74 65.0 6.44e-01 95.2% 94.1%
3168452 331.10.2.3 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › Med1 0.69 48.0 4.42e-01 89.2% 57.1%
3979195 274.1.1.35 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF2509 0.67 52.0 4.55e-01 86.7% 55.2%
4122018 4099.1.1.10 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.66 48.0 4.50e-01 91.6% 63.0%
3943357 274.1.1.35 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF2509 0.65 49.0 4.92e-01 88.0% 78.8%
2639646 331.3.1.19 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C 0.64 54.0 4.05e-01 91.6% 49.5%
3739945 5.1.4.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.63 56.0 3.67e-01 100.0% 38.7%
4948950 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.63 44.0 4.19e-01 74.7% 61.6%
3337354 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.63 48.0 4.13e-01 81.9% 94.6%
3241869 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.62 43.0 3.90e-01 78.3% 53.6%
3252765 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.62 47.0 4.03e-01 88.0% 50.4%
None — 0.62 43.0 2.78e-01 85.5% 14.5%
4046583 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.62 51.0 4.38e-01 90.4% 56.9%
5040587 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.62 54.0 4.38e-01 96.4% 58.1%
3724602 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.61 54.0 3.57e-01 100.0% 52.9%
3487462 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 50.0 4.31e-01 90.4% 56.9%
3219425 5.1.3.238 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29568 0.61 54.0 4.73e-01 98.8% 72.8%
3492330 5.1.4.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 0.61 53.0 3.50e-01 100.0% 39.7%
3589620 4312.1.1.11 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE-like_toxin 0.61 41.0 3.99e-01 91.6% 63.3%
3958686 331.3.1.20 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C 0.60 53.0 3.89e-01 96.4% 46.8%
3451758 243.5.1.1 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 0.60 46.0 4.33e-01 83.1% 86.7%
None — 0.60 53.0 3.52e-01 100.0% 64.3%
3612513 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 53.0 3.47e-01 100.0% 59.1%
3933159 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 53.0 3.56e-01 100.0% 57.7%
3212893 5.1.3.57 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › IKI3 0.59 52.0 3.42e-01 98.8% 46.1%
4027070 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 51.0 3.82e-01 97.6% 45.4%
5026576 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.58 35.0 3.52e-01 81.9% 58.8%
4002261 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 49.0 3.03e-01 100.0% 20.6%
3988075 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 48.0 3.19e-01 95.2% 26.6%
3811762 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.55 48.0 3.29e-01 100.0% 61.8%
1933323 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 47.0 3.12e-01 100.0% 37.4%
3817060 109.4.1.1794 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.54 47.0 2.94e-01 100.0% 19.6%
3820829 5.1.5.66 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.53 46.0 3.18e-01 98.8% 31.1%
3474457 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 39.0 3.79e-01 80.7% 83.2%
3999576 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.52 46.0 3.80e-01 97.6% 65.5%
4114928 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.51 42.0 3.29e-01 91.6% 43.8%
3578398 4099.1.1.29 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29306 0.50 44.0 3.48e-01 96.4% 58.2%
D6 medium residues 630-681
PDB
Domain cluster: rep: ON857934.1__UVN13634.1__FBPa24_0035__00035__D323-372
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.71 51.0 4.50e-01 76.9% 63.6%
1w0pA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.70 53.0 3.65e-01 82.7% 25.4%
4qiwB04 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.67 54.0 3.92e-01 96.2% 50.3%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 51.0 4.74e-01 84.6% 72.3%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 49.0 3.08e-01 82.7% 17.5%
1uasA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 45.0 3.88e-01 78.8% 98.9%
3vcaA02 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.61 44.0 3.41e-01 76.9% 73.1%
6muwK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.61 43.0 3.00e-01 76.9% 99.5%
2aq5A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 44.0 2.72e-01 82.7% 12.2%
7ylsB01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.59 43.0 3.44e-01 78.8% 88.9%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.58 40.0 3.43e-01 73.1% 55.1%
7jl1B01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.58 42.0 3.14e-01 80.8% 60.3%
1rypA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.58 41.0 2.78e-01 80.8% 48.6%
2p18A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.58 47.0 3.05e-01 96.2% 36.0%
3wwxA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 41.0 2.49e-01 75.0% 11.8%
2bseA00 2.60.40.1830 Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain 0.57 41.0 3.35e-01 78.8% 95.3%
5g5gB02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.56 40.0 3.39e-01 76.9% 58.5%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 41.0 3.13e-01 82.7% 33.6%
1yqsA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 39.0 2.41e-01 75.0% 11.3%
3riqA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.55 38.0 2.19e-01 73.1% 7.4%
7q04F01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.55 38.0 3.16e-01 76.9% 89.0%
3t0qA00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.55 38.0 2.39e-01 75.0% 49.0%
1wscA01 3.30.700.20 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 0.54 40.0 3.01e-01 84.6% 83.2%
3n4eA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 41.0 3.39e-01 86.5% 97.1%
4fdtB00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.53 42.0 2.59e-01 94.2% 87.9%
3unbF00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 38.0 2.52e-01 80.8% 80.3%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 41.0 3.43e-01 96.2% 61.2%
2r0cA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.50 40.0 3.09e-01 96.2% 87.0%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3589569 243.3.1.13 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 0.71 50.0 4.80e-01 75.0% 75.0%
4929797 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.67 49.0 4.77e-01 82.7% 71.2%
3621408 5.1.4.74 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.66 50.0 3.08e-01 82.7% 13.5%
3215376 5.1.4.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 0.66 48.0 2.88e-01 80.8% 11.9%
5643 809.2.1.1 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like 0.63 46.0 4.27e-01 86.5% 60.6%
3291683 4221.1.1.0 ↗ a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like 0.61 43.0 3.70e-01 76.9% 47.8%
3960877 295.1.1.27 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 0.61 45.0 4.13e-01 80.8% 72.9%
3706524 5.1.2.33 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 0.61 42.0 2.64e-01 73.1% 13.6%
2521302 210.1.1.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.59 41.0 2.80e-01 75.0% 61.0%
4864284 5.1.4.267 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF28639 0.58 43.0 3.15e-01 86.5% 26.4%
3629697 5.1.3.183 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FG-GAP, FG-GAP_3 0.58 43.0 2.61e-01 82.7% 13.8%
5016556 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 42.0 3.57e-01 78.8% 48.9%
1156585 5092.1.1.4 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Caudo_bapla_RBP 0.58 42.0 3.34e-01 78.8% 90.3%
3958695 3484.1.1.2 ↗ a+b two layers › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Glyco_hydro_64 0.56 40.0 2.93e-01 78.8% 26.2%
5054507 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 39.0 3.59e-01 78.8% 57.3%
3346566 1.1.7.85 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › BRX 0.55 38.0 3.77e-01 73.1% 78.2%
3839607 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.55 39.0 3.11e-01 76.9% 72.9%
3404297 4.1.1.326 ↗ beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 0.53 40.0 3.95e-01 84.6% 90.9%
4380331 295.1.1.27 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF25991 0.51 41.0 3.83e-01 94.2% 71.4%
3931157 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.50 35.0 3.31e-01 73.1% 56.9%