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OK040171.1__UAV84634.1__PHB09_139__00138

Bact-Vir

OK040171.1__UAV84634.1__PHB09_139__00138

Identity

Accession:
OK040171 ↗
Kingdom:
phage

Quality

92.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Dilongvirus› Pseudomonas_phage_PHB09

TaxID: 2867265

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-116
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pjjA04 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.58 37.0 3.52e-01 100.0% 53.6%
4lrvF00 1.10.1220.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › DNA sulphur modification protein DndE 0.53 29.0 3.01e-01 84.1% 54.4%
6nplA01 1.20.1740.10 Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I 0.51 46.0 3.02e-01 100.0% 42.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4371241 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.56 37.0 3.72e-01 94.4% 65.5%
3328443 5055.1.1.8 ↗ extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel › zf-XS 0.55 39.0 4.31e-01 83.2% 97.5%
1887687 5052.1.1.1 ↗ alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein › SDF 0.55 48.0 3.29e-01 100.0% 62.4%
4664985 1002.1.1.0 ↗ alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel 0.50 36.0 3.52e-01 87.9% 67.5%