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OK040780.1__UDL14872.1__SEA_SARGE_25__00025

Bact-Vir

OK040780.1__UDL14872.1__SEA_SARGE_25__00025

Identity

Accession:
OK040780 ↗
Kingdom:
phage

Quality

88.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sargevirus› Arthrobacter_phage_Sarge

TaxID: 2885974

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-83
PDB
Domain cluster: rep: KF692088.2__AHB31633.1__ArV2_gp23__00023__D17-96
D2 high residues 146-202
PDB
Domain cluster: rep: KF692088.2__AHB31633.1__ArV2_gp23__00023__D171-221
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d5sB00 2.10.310.10 Mainly Beta › Ribbon › Serpins fold › Serpins superfamily 0.64 34.0 3.88e-01 89.5% 68.3%
1xjkA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.61 43.0 2.45e-01 75.4% 56.1%
4jdeA01 2.60.40.3820 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 2.94e-01 75.4% 67.9%
4zg5A00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.54 45.0 3.00e-01 96.5% 89.5%
1kpsC00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.53 37.0 2.87e-01 78.9% 37.2%
4wv3B01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.51 40.0 2.55e-01 100.0% 80.8%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 36.0 3.33e-01 86.0% 60.6%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4777641 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.66 34.0 4.17e-01 84.2% 81.8%
4772436 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.64 35.0 4.12e-01 89.5% 82.4%
4792646 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.63 34.0 3.88e-01 89.5% 73.7%
3942207 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.61 34.0 2.42e-01 87.7% 16.6%
4785460 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.60 33.0 3.81e-01 89.5% 84.8%
4831615 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.59 33.0 3.90e-01 94.7% 90.6%
4774023 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.58 33.0 3.78e-01 96.5% 85.7%
4968638 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.58 44.0 2.90e-01 86.0% 34.9%
4013174 243.1.1.83 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26061 0.56 44.0 3.16e-01 91.2% 95.1%
5061011 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.53 35.0 2.26e-01 70.2% 29.3%
D3 medium residues 84-145
PDB
Domain cluster: representative