OK040790.1UDL15866.1SEA_PUMPERNICKEL_75__00075

Bact-Vir

OK040790.1__UDL15866.1__SEA_PUMPERNICKEL_75__00075

Identity

77.2 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Pumpernickelvirus› Microbacterium_phage_Pumpernickel

TaxID: 2885983

View cluster (12 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 77-133_404-520

PDB

Domain cluster: rep: KX578043.1__AOT27930.1__X__00015__D87-267

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03237.22 best	Terminase_6N	52.2	9.10e-14	93.1%	67.0%

D2 high residues 136-245_366-401

PDB

Domain cluster: rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00388__D99-198_300-332

D3 high residues 259-354

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2cw8A03	3.10.28.10	Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases	0.75	65.0	5.25e-01	91.7%	85.2%
2cq8A01	1.10.1200.10	Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like	0.55	32.0	3.48e-01	90.6%	67.9%
7drjB01	1.20.120.1760	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain	0.55	45.0	3.69e-01	90.6%	69.4%
4hehA01	1.10.1240.10	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain	0.54	41.0	4.37e-01	82.3%	96.4%
2ejaA00	3.20.20.210	Alpha Beta › Alpha-Beta Barrel › TIM Barrel ›	0.53	42.0	3.02e-01	89.6%	52.5%
3evyA00	1.20.58.910	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.53	38.0	4.06e-01	79.2%	88.0%
3owaA01	1.10.540.10	Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain	0.53	39.0	3.55e-01	80.2%	76.8%
4bmoA00	1.10.620.20	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A	0.50	43.0	3.18e-01	99.0%	45.9%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3469430	206.1.1.0 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase	0.61	49.0	2.90e-01	87.5%	25.0%

D4 high residues 566-737

PDB

Domain cluster: rep: IMGVR_UViG_3300010237_000006-3300010237-Ga0136250_1000002017__D103-269

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF17289.9 best	Terminase_6C	36.4	7.00e-09	87.2%	98.7%

D5 medium residues 23-76

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5l8sA01	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.58	43.0	2.87e-01	85.2%	18.7%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4254672	2003.1.5.35 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › LCM	0.58	41.0	2.51e-01	77.8%	10.8%