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OK040790.1__UDL15920.1__SEA_PUMPERNICKEL_163__00129
Bact-VirOK040790.1__UDL15920.1__SEA_PUMPERNICKEL_163__00129
Identity
- Accession:
- OK040790 ↗
- Kingdom:
- phage
Quality
89.9
mean pLDDT
Taxonomy
TaxID: 2885983
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-60
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.79 | 65.0 | 5.49e-01 | 89.8% | 55.2% |
| 3oceA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.75 | 43.0 | 4.51e-01 | 76.3% | 61.8% |
| 1zx3A01 | 1.10.287.1020 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › NE0241-like | 0.70 | 55.0 | 4.86e-01 | 86.4% | 64.7% |
| 3gg7A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.65 | 54.0 | 3.47e-01 | 88.1% | 100.0% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.62 | 56.0 | 4.04e-01 | 100.0% | 48.2% |
| 2kebA00 | 1.10.8.530 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA polymerase alpha-primase, subunit B, N-terminal domain | 0.61 | 43.0 | 3.96e-01 | 86.4% | 56.4% |
| 5izdA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.60 | 48.0 | 3.40e-01 | 89.8% | 81.3% |
| 2yc3A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.56 | 41.0 | 2.83e-01 | 79.7% | 43.8% |
| 2m4gA00 | 6.10.20.70 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.55 | 42.0 | 3.99e-01 | 86.4% | 77.3% |
| 1whrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.54 | 40.0 | 3.19e-01 | 79.7% | 62.1% |
| 3fewX02 | 3.30.1310.40 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › | 0.52 | 37.0 | 3.30e-01 | 78.0% | 57.9% |
| 1tuoA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.52 | 39.0 | 3.18e-01 | 83.1% | 100.0% |
| 4zdnA02 | 1.10.1240.100 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.52 | 36.0 | 3.11e-01 | 72.9% | 81.9% |
| 1td6A01 | 1.20.1480.10 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › hypothetical protein mp506/mpn330, domain 1 | 0.52 | 45.0 | 3.69e-01 | 94.9% | 72.5% |
| 7powA01 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.51 | 45.0 | 3.13e-01 | 100.0% | 91.4% |
| 2z0fA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.50 | 37.0 | 2.97e-01 | 79.7% | 99.2% |
| 1sr2A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.50 | 42.0 | 3.34e-01 | 91.5% | 54.3% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928595 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.87 | 63.0 | 5.12e-01 | 76.3% | 42.9% |
| 4994233 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.84 | 64.0 | 5.78e-01 | 94.9% | 60.0% |
| 5045263 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.83 | 55.0 | 4.98e-01 | 72.9% | 51.2% |
| 5072014 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.83 | 65.0 | 6.00e-01 | 93.2% | 66.7% |
| 5012232 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.82 | 63.0 | 6.56e-01 | 84.7% | 87.3% |
| 4980496 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.81 | 53.0 | 3.85e-01 | 81.4% | 26.7% |
| 4632125 | 101.1.11.30 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › FitA-like_RHH | 0.80 | 56.0 | 5.27e-01 | 89.8% | 61.4% |
| 5033202 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.79 | 64.0 | 5.48e-01 | 86.4% | 61.1% |
| 4980865 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.79 | 56.0 | 5.01e-01 | 74.6% | 57.5% |
| 3586991 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.78 | 54.0 | 4.93e-01 | 72.9% | 56.0% |
| 3005818 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.75 | 56.0 | 5.56e-01 | 79.7% | 85.5% |
| 5011906 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.73 | 51.0 | 5.27e-01 | 74.6% | 80.0% |
| 4993165 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.72 | 59.0 | 5.01e-01 | 94.9% | 55.8% |
| 3874841 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.72 | 55.0 | 5.30e-01 | 79.7% | 90.8% |
| 3790416 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.72 | 61.0 | 5.58e-01 | 89.8% | 85.3% |
| 4946062 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.71 | 51.0 | 5.40e-01 | 81.4% | 90.0% |
| 3483583 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 59.0 | 5.39e-01 | 88.1% | 85.3% |
| 5027938 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.71 | 37.0 | 2.95e-01 | 94.9% | 27.0% |
| 2865 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.70 | 55.0 | 4.84e-01 | 86.4% | 65.1% |
| 4282585 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.69 | 55.0 | 4.80e-01 | 84.7% | 72.9% |
| 4946063 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.66 | 52.0 | 5.42e-01 | 93.2% | 94.5% |
| 3560739 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.59 | 47.0 | 3.09e-01 | 93.2% | 90.8% |
| 4467072 | 101.1.9.142 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2015 | 0.57 | 48.0 | 4.48e-01 | 100.0% | 90.0% |
| 3470895 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 49.0 | 2.68e-01 | 100.0% | 20.8% |
| 3672 | 4270.1.1.1 ↗ | alpha bundles › N-terminal domain of Hypothetical protein MPN330 › N-terminal domain of Hypothetical protein MPN330 › N-terminal domain of Hypothetical protein MPN330 › DUF3196 | 0.52 | 45.0 | 3.69e-01 | 94.9% | 72.5% |