Back to structures

OK040793.1__UDL16443.1__SEA_ZOOMAN_202__00160

Bact-Vir

OK040793.1__UDL16443.1__SEA_ZOOMAN_202__00160

Identity

Accession:
OK040793 ↗
Kingdom:
phage

Quality

70.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 92-202
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8bdqA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.89 84.0 5.63e-01 100.0% 35.3%
1qazA00 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.85 79.0 5.42e-01 100.0% 33.3%
2fuqA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.81 75.0 5.25e-01 100.0% 36.1%
4dloB02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.75 61.0 6.07e-01 100.0% 82.1%
1jmwA00 1.20.120.30 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain 0.72 49.0 4.49e-01 70.3% 71.2%
1y1uA01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.71 56.0 4.62e-01 82.9% 87.2%
3anwA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 48.0 4.81e-01 71.2% 85.8%
2b7mA00 1.20.1280.170 Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 0.68 60.0 3.91e-01 98.2% 30.4%
2gnxA01 1.10.3450.30 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › 0.65 53.0 4.49e-01 86.5% 54.2%
1xg2B00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.65 45.0 4.07e-01 70.3% 57.0%
3qc1A01 1.25.40.540 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TAP42-like family 0.64 57.0 5.22e-01 100.0% 84.8%
4etrB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.64 44.0 4.31e-01 70.3% 100.0%
2rkkA01 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.64 49.0 4.43e-01 82.0% 89.1%
1k0oB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.64 53.0 5.13e-01 91.9% 80.5%
2fbnA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 49.0 4.48e-01 98.2% 60.1%
1zeeA01 1.20.58.600 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 49.0 4.84e-01 81.1% 89.8%
5ux1D00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.64 52.0 4.30e-01 87.4% 83.8%
3urzA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 44.0 3.67e-01 72.1% 48.5%
1ihgA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 45.0 4.17e-01 100.0% 57.9%
5g05P02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 41.0 3.42e-01 100.0% 36.8%
4ga0A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 39.0 3.66e-01 81.1% 49.0%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.62 46.0 4.81e-01 77.5% 100.0%
4gywA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 41.0 4.22e-01 100.0% 71.4%
1a17A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 41.0 3.67e-01 100.0% 47.2%
1j1jA01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.59 48.0 4.57e-01 87.4% 88.6%
2xevB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 40.0 3.94e-01 100.0% 62.9%
8g0lB01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 44.0 3.03e-01 100.0% 22.9%
6fdpA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 39.0 3.87e-01 100.0% 62.5%
2ooeA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 44.0 3.70e-01 100.0% 46.3%
4jhrB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 46.0 3.49e-01 100.0% 34.3%
4o6mA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.56 48.0 4.05e-01 95.5% 87.2%
7yb9A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 40.0 3.37e-01 100.0% 39.4%
2lqgA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.55 41.0 3.89e-01 79.3% 81.9%
2nxpB00 1.25.40.500 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain 0.55 39.0 3.64e-01 92.8% 56.6%
4p3gD00 1.10.3450.40 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain 0.54 47.0 4.01e-01 99.1% 63.1%
3k9iA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 36.0 3.74e-01 100.0% 71.8%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.51 39.0 3.66e-01 82.0% 89.9%
2dg7A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 43.0 3.72e-01 97.3% 91.4%
5ko4A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.50 34.0 3.62e-01 80.2% 77.2%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4023121 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.79 73.0 5.51e-01 100.0% 58.8%
4017645 603.1.1.6 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.76 59.0 4.99e-01 82.9% 98.9%
3669139 109.4.1.359 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C 0.73 66.0 4.06e-01 100.0% 20.2%
3421659 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 62.0 4.97e-01 100.0% 48.6%
3571780 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.72 50.0 4.58e-01 71.2% 60.8%
3662138 109.4.1.222 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DCB 0.72 62.0 4.92e-01 100.0% 46.7%
3600057 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.70 64.0 4.84e-01 100.0% 46.5%
3656131 109.4.1.2 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm 0.70 57.0 4.22e-01 100.0% 34.9%
3420847 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.70 55.0 4.82e-01 85.6% 84.1%
3536246 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.69 47.0 4.31e-01 70.3% 66.2%
3214280 109.25.1.1 alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › GAIN 0.68 57.0 5.58e-01 100.0% 84.2%
3909548 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.68 47.0 4.11e-01 71.2% 74.5%
3716405 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 52.0 3.66e-01 100.0% 25.1%
3600701 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 60.0 4.63e-01 100.0% 53.6%
3610162 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 60.0 4.21e-01 100.0% 55.2%
3411108 174.1.1.1 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.67 46.0 4.35e-01 71.2% 67.4%
3231922 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 52.0 3.93e-01 100.0% 34.2%
4398872 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.66 45.0 4.04e-01 70.3% 71.2%
3899721 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.65 45.0 3.97e-01 71.2% 70.9%
3765032 633.23.1.34 alpha bundles › Bromodomain-like › Claudin › Claudin › CD20 0.64 45.0 4.15e-01 72.1% 75.2%
3410818 174.1.1.1 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.64 45.0 4.33e-01 71.2% 66.4%
3655766 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.64 41.0 3.64e-01 100.0% 45.8%
3525698 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.63 43.0 4.07e-01 70.3% 77.8%
3552390 109.4.1.192 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.63 42.0 3.89e-01 100.0% 53.6%
3261882 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 54.0 3.37e-01 98.2% 31.7%
3338353 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.62 43.0 3.82e-01 71.2% 54.4%
3548233 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.62 43.0 3.83e-01 72.1% 72.7%
3997255 109.4.1.2143 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16, TTC7_N 0.61 53.0 3.19e-01 100.0% 13.0%
3388493 633.10.1.15 alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 0.61 43.0 4.10e-01 72.1% 70.0%
3481289 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.61 42.0 3.97e-01 70.3% 62.2%
3398428 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.61 42.0 3.84e-01 71.2% 68.0%
3502644 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.61 54.0 4.66e-01 100.0% 83.3%
3495283 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.61 42.0 3.94e-01 70.3% 63.0%
4977511 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.60 41.0 4.06e-01 70.3% 66.1%
3316910 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.60 42.0 3.79e-01 71.2% 54.2%
3594923 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 47.0 3.84e-01 100.0% 43.2%
3485664 174.1.1.1 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.59 41.0 3.96e-01 72.1% 64.6%
4979030 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.59 43.0 3.95e-01 74.8% 73.1%
3355425 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 44.0 3.83e-01 100.0% 52.4%
3911777 633.10.1.15 alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 0.57 41.0 3.89e-01 73.9% 67.4%
3692481 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 50.0 3.88e-01 100.0% 46.9%
3257428 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 51.0 3.80e-01 100.0% 41.2%
3607681 633.10.1.15 alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 0.55 40.0 3.79e-01 75.7% 69.6%
3756853 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.55 46.0 3.84e-01 90.1% 72.6%
3865873 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.55 46.0 4.05e-01 90.1% 76.9%
3856927 633.23.1.34 alpha bundles › Bromodomain-like › Claudin › Claudin › CD20 0.55 46.0 3.93e-01 90.1% 78.9%
3542652 633.23.1.34 alpha bundles › Bromodomain-like › Claudin › Claudin › CD20 0.55 46.0 3.96e-01 90.1% 75.9%
3913234 633.21.1.23 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 0.54 45.0 4.24e-01 90.1% 80.7%
3707921 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.54 43.0 4.38e-01 90.1% 86.4%
3994022 633.21.1.23 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 0.54 45.0 4.17e-01 90.1% 90.0%
3923182 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.54 45.0 4.08e-01 90.1% 81.3%
3888824 601.1.2.11 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › CD20 0.54 46.0 4.12e-01 90.1% 86.7%
3873540 633.23.1.34 alpha bundles › Bromodomain-like › Claudin › Claudin › CD20 0.54 46.0 3.99e-01 93.7% 91.8%
3503767 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.53 45.0 4.14e-01 90.1% 80.7%
3879044 174.1.1.43 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.53 45.0 4.39e-01 93.7% 86.4%
3773479 633.21.1.23 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 0.53 45.0 4.32e-01 93.7% 85.4%
3834131 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.53 44.0 4.15e-01 90.1% 83.7%
3503770 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.52 43.0 4.00e-01 90.1% 83.4%
3373991 5001.1.1.10 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Ceramidase 0.52 47.0 3.71e-01 100.0% 50.0%
3873872 633.21.1.23 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 0.52 44.0 3.86e-01 93.7% 78.8%
3718720 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 46.0 3.19e-01 100.0% 34.9%
3895743 3615.1.1.7 alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › CD20 0.51 39.0 3.30e-01 81.1% 82.6%
D2 medium residues 203-243_279-295_310-321
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6lr1A00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.62 46.0 2.84e-01 81.4% 65.9%
3es5A02 1.20.272.60 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.59 40.0 3.33e-01 71.4% 69.7%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3653389 136.1.1.1 alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase 0.54 42.0 2.80e-01 87.1% 89.2%
3744130 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.52 40.0 2.82e-01 82.9% 41.8%
3928204 7062.1.1.0 alpha bundles › Helical domain of retinal degeneration 3 protein › Helical domain of retinal degeneration 3 protein › Helical domain of retinal degeneration 3 protein 0.51 39.0 3.33e-01 82.9% 87.5%
D3 medium residues 244-278_296-309_322-385
PDB