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OK040793.1__UDL16537.1__SEA_ZOOMAN_296__00254
Bact-VirOK040793.1__UDL16537.1__SEA_ZOOMAN_296__00254
Identity
- Accession:
- OK040793 ↗
- Kingdom:
- phage
Quality
58.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-71
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zetC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.68 | 54.0 | 4.06e-01 | 100.0% | 36.2% |
| 1zbdB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 49.0 | 3.94e-01 | 100.0% | 45.5% |
| 1x4uA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 51.0 | 4.90e-01 | 100.0% | 87.0% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.58 | 28.0 | 2.85e-01 | 86.4% | 42.1% |
| 3zihA00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.58 | 34.0 | 3.07e-01 | 84.7% | 43.0% |
| 5dahA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 43.0 | 3.26e-01 | 100.0% | 31.8% |
| 2ku3A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 39.0 | 3.90e-01 | 100.0% | 74.2% |
| 2xocA01 | 3.30.40.140 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.53 | 44.0 | 4.06e-01 | 94.9% | 89.7% |
| 5xfoA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 38.0 | 3.95e-01 | 89.8% | 83.9% |
| 5tdrA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 38.0 | 3.70e-01 | 100.0% | 70.0% |
| 2lcqA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.52 | 28.0 | 3.22e-01 | 94.9% | 73.7% |
| 5feyA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 40.0 | 3.69e-01 | 88.1% | 65.4% |
| 4by6D02 | 1.25.40.800 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 37.0 | 2.59e-01 | 79.7% | 72.9% |
| 4bs9A04 | 3.30.40.250 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.51 | 40.0 | 3.51e-01 | 88.1% | 82.2% |
| 1yc5A02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.51 | 33.0 | 3.04e-01 | 79.7% | 48.8% |
| 1mhyD00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.51 | 42.0 | 2.54e-01 | 100.0% | 21.0% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.14e-01 | 93.2% | 52.1% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3796017 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.72 | 42.0 | 3.89e-01 | 78.0% | 45.3% |
| 3889954 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.70 | 51.0 | 5.49e-01 | 100.0% | 92.0% |
| 3686834 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.66 | 40.0 | 3.74e-01 | 76.3% | 48.0% |
| 4967708 | 613.1.1.0 ↗ | alpha complex topology › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) › Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) | 0.63 | 43.0 | 2.86e-01 | 100.0% | 17.9% |
| 4945304 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 41.0 | 3.88e-01 | 86.4% | 53.3% |
| 3224202 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 37.0 | 4.25e-01 | 98.3% | 82.5% |
| 3592936 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.60 | 51.0 | 4.83e-01 | 100.0% | 81.4% |
| 3601439 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.59 | 51.0 | 4.60e-01 | 100.0% | 74.1% |
| 3933197 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 43.0 | 4.44e-01 | 98.3% | 83.6% |
| 3675445 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 32.0 | 3.82e-01 | 86.4% | 85.7% |
| 3306311 | 376.1.3.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_2 | 0.58 | 41.0 | 4.28e-01 | 100.0% | 90.0% |
| 3684262 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.56 | 44.0 | 4.47e-01 | 100.0% | 90.0% |
| 4456198 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 45.0 | 3.33e-01 | 98.3% | 46.5% |
| None | — | 0.56 | 44.0 | 4.22e-01 | 88.1% | 80.0% | |
| 3929687 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.55 | 38.0 | 3.75e-01 | 100.0% | 66.2% |
| 3183646 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.55 | 38.0 | 3.50e-01 | 74.6% | 90.4% |
| 3993660 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 42.0 | 3.79e-01 | 88.1% | 76.5% |
| 3255511 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.54 | 35.0 | 2.50e-01 | 84.7% | 21.1% |
| 3465479 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.53 | 35.0 | 2.31e-01 | 84.7% | 15.4% |
| 3824691 | 375.3.1.4 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › Zn_ribbon_20 | 0.53 | 32.0 | 3.46e-01 | 84.7% | 72.0% |
| 3670750 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 35.0 | 2.81e-01 | 84.7% | 33.3% |
| 3518157 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 34.0 | 3.59e-01 | 84.7% | 76.0% |
| 4120038 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.53 | 41.0 | 3.81e-01 | 88.1% | 97.5% |
| 3244227 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.53 | 39.0 | 3.51e-01 | 100.0% | 56.5% |
| 3785138 | 376.1.1.129 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF29536 | 0.52 | 36.0 | 3.46e-01 | 100.0% | 61.4% |
| None | — | 0.52 | 41.0 | 3.91e-01 | 88.1% | 87.1% | |
| 3227165 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.52 | 41.0 | 3.46e-01 | 88.1% | 61.5% |
| 4024651 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.52 | 41.0 | 4.10e-01 | 88.1% | 90.0% |
| 3938245 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.51 | 34.0 | 2.37e-01 | 84.7% | 18.7% |
| 3226163 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.51 | 40.0 | 3.79e-01 | 88.1% | 81.3% |
| 3223233 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.51 | 42.0 | 2.89e-01 | 96.6% | 83.5% |
| 3452792 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.51 | 38.0 | 3.33e-01 | 88.1% | 53.3% |
| 3242788 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.51 | 40.0 | 3.66e-01 | 88.1% | 73.8% |
D2
high
residues 99-165