Back to structures

OK040794.1__UDL16704.1__SEA_ATUIN_110__00110

Bact-Vir

OK040794.1__UDL16704.1__SEA_ATUIN_110__00110

Identity

Accession:
OK040794 ↗
Kingdom:
phage

Quality

60.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-70
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 42.0 4.86e-01 72.1% 79.6%
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.71 63.0 4.02e-01 100.0% 34.0%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 61.0 4.96e-01 98.5% 79.7%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.68 60.0 4.61e-01 98.5% 58.4%
7fisA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.68 60.0 3.94e-01 100.0% 33.9%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.68 56.0 5.60e-01 92.6% 97.1%
4r1kB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 58.0 4.72e-01 100.0% 86.0%
3h3hB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 58.0 4.92e-01 100.0% 93.3%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 50.0 5.17e-01 97.1% 95.2%
3fh1A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 56.0 4.68e-01 100.0% 88.5%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 54.0 4.54e-01 97.1% 90.0%
3er7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 53.0 4.46e-01 97.1% 92.7%
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.63 51.0 4.88e-01 86.8% 92.2%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 54.0 4.65e-01 100.0% 83.3%
3p0lD00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.63 51.0 3.72e-01 97.1% 32.4%
4qqsB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 55.0 3.59e-01 100.0% 27.8%
3zqsA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.63 46.0 4.28e-01 100.0% 61.4%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.62 54.0 4.85e-01 97.1% 84.0%
6p2kB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 52.0 3.35e-01 100.0% 37.6%
1epwA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 36.0 2.52e-01 70.6% 16.7%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 43.0 4.31e-01 91.2% 70.8%
3oloA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.61 52.0 4.45e-01 97.1% 77.5%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.60 41.0 3.86e-01 95.6% 55.1%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 52.0 3.57e-01 95.6% 29.9%
1tkkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 40.0 3.49e-01 70.6% 92.2%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 45.0 3.94e-01 97.1% 52.3%
4kujA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 49.0 3.83e-01 94.1% 98.0%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.58 50.0 3.26e-01 98.5% 27.8%
4dxkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 39.0 3.31e-01 70.6% 72.0%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 46.0 3.48e-01 100.0% 36.6%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 41.0 4.03e-01 94.1% 69.3%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 47.0 4.77e-01 91.2% 92.4%
5xd6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 42.0 3.82e-01 80.9% 91.5%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 45.0 3.52e-01 97.1% 38.3%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 45.0 4.61e-01 92.6% 92.2%
3plsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 45.0 3.96e-01 92.6% 99.0%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 47.0 3.56e-01 100.0% 38.3%
3bgtA01 2.40.400.10 Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like 0.54 48.0 3.34e-01 100.0% 77.5%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.54 43.0 3.34e-01 88.2% 39.0%
1s67L00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 43.0 3.67e-01 92.6% 78.2%
7snsB01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 46.0 3.51e-01 98.5% 66.0%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 43.0 3.56e-01 97.1% 59.1%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 43.0 3.45e-01 100.0% 51.7%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587060 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.82 72.0 6.98e-01 95.6% 93.3%
3628091 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.69 59.0 3.45e-01 100.0% 16.5%
3291057 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.69 60.0 5.98e-01 98.5% 100.0%
4087673 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.67 46.0 4.12e-01 72.1% 93.0%
4973405 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.67 59.0 3.72e-01 100.0% 28.5%
4062936 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.67 46.0 4.04e-01 72.1% 89.5%
4067945 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.67 45.0 3.95e-01 70.6% 89.5%
3597898 5.1.11.13 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_RIC1_2nd 0.67 57.0 3.25e-01 100.0% 23.7%
4021124 5.1.5.88 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nucleoporin_N 0.66 56.0 3.40e-01 100.0% 26.2%
3217717 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 60.0 3.64e-01 100.0% 33.6%
3803844 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 56.0 3.47e-01 94.1% 23.3%
3587129 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 50.0 5.11e-01 92.6% 89.2%
3941153 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.65 58.0 3.48e-01 100.0% 37.6%
3440037 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 57.0 3.57e-01 100.0% 44.2%
3255575 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 57.0 3.66e-01 98.5% 26.6%
3237828 331.9.1.9 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 0.64 46.0 3.94e-01 98.5% 46.4%
3595625 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.63 47.0 4.88e-01 79.4% 100.0%
5011312 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.63 52.0 3.76e-01 92.6% 50.7%
4100096 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.63 54.0 3.50e-01 100.0% 37.4%
4431607 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.62 43.0 3.87e-01 73.5% 93.0%
3321190 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 56.0 3.54e-01 100.0% 21.2%
3627111 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 54.0 3.31e-01 100.0% 31.7%
3819893 5.1.4.288 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N 0.61 55.0 3.33e-01 100.0% 17.3%
3215377 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.61 51.0 3.31e-01 100.0% 38.4%
4002884 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.61 53.0 3.95e-01 100.0% 90.5%
3740661 5.1.4.119 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C 0.60 51.0 3.23e-01 100.0% 30.6%
3509038 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.60 44.0 3.90e-01 98.5% 53.0%
4255589 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.60 42.0 3.76e-01 73.5% 97.0%
4193896 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.60 40.0 3.69e-01 70.6% 98.9%
3787920 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.60 51.0 3.28e-01 100.0% 37.7%
4978136 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 50.0 2.86e-01 95.6% 11.5%
1853949 243.1.1.35 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ORF_12_N 0.60 51.0 4.48e-01 100.0% 84.0%
3323188 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.59 49.0 4.34e-01 95.6% 69.5%
3502939 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.57 42.0 3.93e-01 80.9% 66.7%
3449040 9.1.1.34 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › PAP_fibrillin 0.57 47.0 3.65e-01 98.5% 65.7%
3623607 227.1.1.12 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.56 42.0 3.40e-01 82.4% 93.6%
3379143 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.55 39.0 2.70e-01 76.5% 33.2%
4988423 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.53 39.0 3.78e-01 92.6% 70.0%
3001014 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.52 46.0 3.53e-01 100.0% 66.0%
3620679 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.52 45.0 3.35e-01 100.0% 57.8%
6331 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 44.0 3.57e-01 97.1% 58.6%
3274180 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.51 44.0 3.79e-01 98.5% 60.0%
5040875 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.50 41.0 3.30e-01 97.1% 54.8%
D2 high residues 74-161
PDB