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OK040794.1__UDL16706.1__SEA_ATUIN_112__00112
Bact-VirOK040794.1__UDL16706.1__SEA_ATUIN_112__00112
Identity
- Accession:
- OK040794 ↗
- Kingdom:
- phage
Quality
72.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-122
Domain cluster:
rep: MW862992.1__QWY82832.1__SEA_SILENTRX_92__00092__D5-93
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kk7A01 | 3.30.420.400 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.57 | 39.0 | 3.88e-01 | 80.6% | 67.0% |
| 2coaA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 35.0 | 3.40e-01 | 94.2% | 53.4% |
| 2ia1A01 | 3.30.500.20 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains | 0.54 | 34.0 | 3.30e-01 | 85.4% | 55.5% |
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 29.0 | 3.60e-01 | 72.8% | 86.7% |
| 1q5qH00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 44.0 | 3.47e-01 | 89.3% | 76.8% |
| 3w15A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 46.0 | 3.16e-01 | 91.3% | 49.7% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.54 | 41.0 | 4.24e-01 | 81.6% | 86.9% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 41.0 | 3.64e-01 | 83.5% | 92.4% |
| 4bg7A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.53 | 36.0 | 3.69e-01 | 83.5% | 72.4% |
| 2ml5A00 | 3.10.450.410 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 38.0 | 3.42e-01 | 76.7% | 86.5% |
| 2ql8A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.53 | 38.0 | 3.41e-01 | 77.7% | 54.3% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 48.0 | 4.07e-01 | 100.0% | 100.0% |
| 2jh1A01 | 3.90.640.70 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.52 | 36.0 | 3.60e-01 | 71.8% | 94.4% |
| 3vz9B00 | 3.30.457.50 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 | 0.52 | 39.0 | 3.95e-01 | 87.4% | 79.6% |
| 7bwcA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 42.0 | 2.97e-01 | 87.4% | 85.8% |
| 1uypA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 40.0 | 3.01e-01 | 86.4% | 55.1% |
| 1b69A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 30.0 | 3.61e-01 | 82.5% | 88.4% |
| 1lyvA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 36.0 | 2.59e-01 | 73.8% | 52.7% |
| 4e4tA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 42.0 | 3.45e-01 | 93.2% | 85.6% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 41.0 | 2.84e-01 | 89.3% | 55.3% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 41.0 | 2.85e-01 | 88.3% | 52.4% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4436313 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.62 | 49.0 | 5.21e-01 | 86.4% | 96.7% |
| 3347865 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.60 | 40.0 | 3.81e-01 | 95.1% | 57.5% |
| 4978072 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.57 | 43.0 | 4.30e-01 | 82.5% | 75.5% |
| 3262260 | 2003.2.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Molybdopterin | 0.57 | 50.0 | 3.68e-01 | 94.2% | 58.1% |
| 3866247 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.55 | 33.0 | 3.83e-01 | 88.3% | 85.7% |
| 3249973 | 219.1.1.14 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin | 0.55 | 36.0 | 3.17e-01 | 83.5% | 43.1% |
| 2392287 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.55 | 47.0 | 3.43e-01 | 92.2% | 43.2% |
| 4993051 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.55 | 47.0 | 2.97e-01 | 95.1% | 23.8% |
| 4116893 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.55 | 39.0 | 3.34e-01 | 73.8% | 77.1% |
| 3665166 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 42.0 | 3.03e-01 | 83.5% | 50.8% |
| 5060665 | 5.1.11.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta_propel | 0.54 | 44.0 | 2.55e-01 | 86.4% | 12.1% |
| 5039970 | 5.1.4.87 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD | 0.54 | 43.0 | 2.91e-01 | 86.4% | 45.6% |
| None | — | 0.54 | 44.0 | 3.35e-01 | 90.3% | 98.1% | |
| 3214007 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.53 | 37.0 | 3.53e-01 | 86.4% | 59.2% |
| 5040052 | 5.1.4.665 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_2 | 0.52 | 45.0 | 3.10e-01 | 99.0% | 63.7% |
| 4196590 | 5.1.2.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N | 0.52 | 42.0 | 2.95e-01 | 87.4% | 63.8% |
| 3376439 | 5.1.4.276 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR75_2nd | 0.52 | 46.0 | 3.15e-01 | 100.0% | 98.4% |
| 3282813 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.52 | 35.0 | 3.91e-01 | 84.5% | 91.3% |
| 3212863 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 41.0 | 3.02e-01 | 88.3% | 65.5% |
| 3222356 | 4099.1.1.9 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med27 | 0.51 | 43.0 | 3.70e-01 | 93.2% | 80.0% |
| 3324662 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 41.0 | 2.94e-01 | 89.3% | 73.6% |
| 4623646 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.51 | 44.0 | 2.97e-01 | 95.1% | 29.9% |
| 3320258 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.51 | 45.0 | 3.18e-01 | 97.1% | 56.9% |
| 3684699 | 7516.1.1.41 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glucan_synthase | 0.51 | 42.0 | 2.79e-01 | 92.2% | 50.8% |
| 3995776 | 330.3.1.0 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like | 0.51 | 37.0 | 3.95e-01 | 92.2% | 90.0% |
| 5081617 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 44.0 | 2.98e-01 | 93.2% | 33.2% |
| 4941788 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.51 | 45.0 | 3.20e-01 | 100.0% | 46.2% |
| 3602156 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.50 | 39.0 | 3.39e-01 | 82.5% | 74.4% |
| 5038844 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.50 | 37.0 | 4.12e-01 | 86.4% | 98.8% |
| 4966988 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 43.0 | 3.00e-01 | 95.1% | 34.1% |
| 4859805 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.50 | 42.0 | 3.64e-01 | 92.2% | 79.4% |
D2
high
residues 129-178