Back to structures

OK040794.1__UDL16714.1__SEA_ATUIN_120__00120

Bact-Vir

OK040794.1__UDL16714.1__SEA_ATUIN_120__00120

Identity

Accession:
OK040794 ↗
Kingdom:
phage

Quality

91.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-100
PDB
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3witA00 2.20.220.20 Mainly Beta › Single Sheet › Glycosyl hydrolase fold › 0.59 39.0 4.38e-01 91.0% 92.2%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.54 38.0 3.69e-01 74.2% 95.1%
1q7hA01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.54 38.0 4.42e-01 74.2% 100.0%
4esnA00 2.60.320.10 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain 0.54 38.0 4.07e-01 75.3% 93.6%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.70e-01 100.0% 58.3%
3gd0A02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.54 38.0 3.62e-01 76.4% 70.5%
5ocrA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 3.36e-01 100.0% 61.9%
2i8dA01 3.90.1150.200 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.53 38.0 4.03e-01 92.1% 82.7%
5xrkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 37.0 3.21e-01 73.0% 80.9%
3vn5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.53 35.0 3.86e-01 75.3% 89.9%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.53 36.0 3.85e-01 76.4% 87.5%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.53 38.0 3.69e-01 75.3% 72.7%
5ocqA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 3.32e-01 100.0% 63.5%
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.52 44.0 3.55e-01 100.0% 83.4%
1umzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 3.29e-01 100.0% 43.8%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.52 37.0 3.79e-01 75.3% 89.0%
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.51 41.0 2.93e-01 86.5% 82.0%
3u1xA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.51 42.0 3.24e-01 92.1% 64.5%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4958012 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.67 43.0 4.66e-01 75.3% 78.7%
4934918 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.65 42.0 4.69e-01 76.4% 84.3%
5060936 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.61 41.0 4.12e-01 76.4% 67.8%
4987739 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.61 49.0 3.68e-01 89.9% 55.7%
3556708 247.1.1.38 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C 0.61 42.0 4.52e-01 75.3% 86.7%
3899940 331.4.1.9 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C 0.60 42.0 4.43e-01 75.3% 81.2%
5058484 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.59 40.0 4.35e-01 75.3% 87.1%
3781848 247.1.1.38 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C 0.58 40.0 4.33e-01 75.3% 90.0%
5075886 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.58 42.0 4.69e-01 74.2% 100.0%
3851969 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.58 49.0 3.80e-01 92.1% 46.2%
4968280 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.58 41.0 4.16e-01 75.3% 74.4%
2631766 3894.1.1.1 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 0.57 43.0 3.85e-01 92.1% 56.3%
5011313 3504.3.1.1 beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.57 36.0 3.06e-01 78.7% 38.6%
4952432 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.56 41.0 4.62e-01 76.4% 100.0%
3227619 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.56 45.0 3.54e-01 96.6% 41.6%
4026913 243.6.1.4 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.56 43.0 4.41e-01 80.9% 96.5%
3234953 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.56 46.0 3.52e-01 92.1% 46.5%
4978994 241.11.1.0 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like 0.55 44.0 4.16e-01 100.0% 72.4%
6438 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.55 39.0 4.48e-01 76.4% 100.0%
5058991 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.54 39.0 4.38e-01 75.3% 100.0%
3964807 9.7.1.2 beta barrels › Lipocalins/Streptavidin › Metalloprotease inhibitor › Metalloprotease inhibitor › PF28291 0.54 40.0 3.93e-01 76.4% 94.7%
4974156 241.11.1.0 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like 0.54 42.0 4.07e-01 98.9% 74.0%
2162624 3894.1.1.1 beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 0.54 40.0 3.61e-01 92.1% 56.3%
5030565 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.54 38.0 4.32e-01 74.2% 100.0%
3280585 241.11.1.1 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR 0.53 41.0 3.90e-01 100.0% 68.2%
1956217 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 42.0 3.13e-01 88.8% 67.8%
2444658 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.53 42.0 3.13e-01 88.8% 67.8%
4969302 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.53 39.0 4.34e-01 76.4% 98.6%
5021241 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.53 38.0 4.24e-01 74.2% 100.0%
3279474 241.11.1.1 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR 0.53 41.0 3.80e-01 100.0% 64.3%
5003057 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.53 37.0 4.16e-01 73.0% 100.0%
4999340 241.11.1.6 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › TfoX_N 0.52 39.0 3.81e-01 98.9% 71.0%
5011040 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.52 36.0 4.15e-01 74.2% 98.5%
5067171 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.52 36.0 4.15e-01 77.5% 100.0%
5033945 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.52 39.0 4.38e-01 83.1% 100.0%
3515797 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.52 41.0 2.96e-01 89.9% 64.1%
3961944 241.7.1.1 a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N 0.52 40.0 3.89e-01 98.9% 75.0%
3496419 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 41.0 2.43e-01 89.9% 19.8%
4954638 241.9.1.2 a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF5655 0.51 42.0 3.91e-01 100.0% 69.3%
3287429 241.11.1.1 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR 0.51 41.0 3.90e-01 100.0% 72.4%
5059446 241.7.1.1 a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N 0.51 41.0 3.95e-01 98.9% 75.0%
3284412 241.11.1.6 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › TfoX_N 0.51 39.0 3.75e-01 98.9% 70.5%
4974000 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.51 35.0 4.10e-01 84.3% 98.5%
4592810 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 41.0 2.95e-01 89.9% 84.9%
2413833 331.1.1.5 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N 0.51 36.0 3.24e-01 75.3% 57.0%
3604572 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.50 38.0 4.22e-01 85.4% 100.0%