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OK040794.1__UDL16748.1__SEA_ATUIN_154__00154

Bact-Vir

OK040794.1__UDL16748.1__SEA_ATUIN_154__00154

Identity

Accession:
OK040794 ↗
Kingdom:
phage

Quality

90.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-50
PDB
Domain cluster: representative
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gr5C01 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.75 45.0 4.15e-01 100.0% 46.9%
3lgdA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.73 46.0 2.66e-01 100.0% 6.6%
2pstX00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.69 43.0 4.04e-01 100.0% 50.8%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 54.0 4.99e-01 100.0% 68.2%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 55.0 5.10e-01 100.0% 69.7%
4iauA01 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.68 42.0 3.63e-01 100.0% 39.7%
7c2fB01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.68 42.0 3.51e-01 100.0% 34.9%
1o5uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 44.0 3.64e-01 100.0% 37.5%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 56.0 4.79e-01 100.0% 65.1%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 4.76e-01 100.0% 85.0%
2yzyA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.64 46.0 3.22e-01 75.5% 65.6%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 51.0 5.12e-01 100.0% 91.8%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 46.0 3.33e-01 77.6% 84.6%
3obaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 51.0 3.74e-01 87.8% 96.0%
6b9tF01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 41.0 3.16e-01 100.0% 26.4%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 54.0 4.36e-01 100.0% 69.7%
3vzbB02 2.60.200.40 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.61 53.0 3.54e-01 100.0% 95.4%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.71e-01 100.0% 79.0%
5eh1A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 43.0 3.53e-01 100.0% 40.0%
2dhjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 50.0 3.86e-01 100.0% 67.2%
2d93A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 42.0 3.11e-01 100.0% 28.4%
2yn5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 42.0 3.68e-01 100.0% 49.4%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 50.0 3.84e-01 100.0% 42.7%
2pwyA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.58 52.0 4.97e-01 100.0% 98.2%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.57 48.0 3.80e-01 100.0% 90.9%
5c71A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 43.0 3.57e-01 85.7% 92.7%
1i9gA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.57 51.0 4.67e-01 100.0% 87.5%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 50.0 3.83e-01 100.0% 45.6%
4yn3A02 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.57 49.0 3.62e-01 100.0% 94.1%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 49.0 3.68e-01 100.0% 40.3%
3e0rB01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 41.0 3.22e-01 81.6% 33.6%
5escA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 49.0 3.72e-01 100.0% 42.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 44.0 4.43e-01 100.0% 90.2%
3cw3A00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.56 37.0 3.14e-01 100.0% 37.6%
4zciA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 47.0 3.81e-01 100.0% 55.4%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 4.20e-01 100.0% 72.3%
3f6zB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.55 47.0 4.06e-01 98.0% 94.9%
1o54A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.55 49.0 4.31e-01 100.0% 77.8%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 46.0 4.58e-01 98.0% 94.0%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 48.0 3.17e-01 100.0% 25.0%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 47.0 3.30e-01 100.0% 30.2%
3gd0A02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.55 47.0 3.67e-01 100.0% 67.0%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 4.03e-01 100.0% 64.4%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 47.0 3.35e-01 100.0% 31.8%
6rtqA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.54 47.0 3.49e-01 100.0% 89.5%
1vl7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 47.0 3.45e-01 100.0% 36.3%
3qnfC01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.54 44.0 2.94e-01 100.0% 22.0%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 47.0 3.16e-01 100.0% 26.7%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 42.0 3.95e-01 100.0% 69.7%
2yvsA01 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.53 43.0 3.28e-01 100.0% 38.6%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 43.0 4.01e-01 100.0% 84.3%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 46.0 3.65e-01 100.0% 55.8%
5fljA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 43.0 3.01e-01 100.0% 74.2%
3dlqR02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.25e-01 87.8% 89.0%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 44.0 3.56e-01 100.0% 49.0%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.52 44.0 3.30e-01 100.0% 38.2%
2dk6A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.51 43.0 3.57e-01 100.0% 77.7%
3jcuB02 3.10.680.10 Alpha Beta › Roll › Photosystem II CP47 reaction center protein › Photosystem II CP47 reaction center protein 0.51 44.0 3.05e-01 100.0% 46.8%
2cocA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.47e-01 100.0% 77.0%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 41.0 4.16e-01 100.0% 100.0%
3b8fB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.50 44.0 3.16e-01 100.0% 34.5%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 41.0 3.81e-01 98.0% 73.8%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3723066 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.71 45.0 3.03e-01 100.0% 16.6%
4975364 56.2.1.0 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT 0.70 59.0 5.48e-01 100.0% 76.9%
4118226 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 56.0 5.08e-01 100.0% 67.1%
3225056 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 56.0 4.48e-01 100.0% 63.6%
3736175 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 4.80e-01 100.0% 60.0%
3511375 4.1.1.349 beta barrels › SH3 › SH3 › SH3 › ROF 0.66 57.0 4.78e-01 100.0% 58.8%
None 0.64 55.0 3.46e-01 98.0% 57.0%
3903484 220.1.1.64 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.64 56.0 4.35e-01 100.0% 60.0%
3272363 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.64 54.0 4.46e-01 100.0% 61.1%
3713023 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 58.0 3.96e-01 100.0% 46.9%
4936291 4.1.1.487 beta barrels › SH3 › SH3 › SH3 › DUF7205 0.64 54.0 5.00e-01 100.0% 75.4%
5080336 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 52.0 4.87e-01 100.0% 75.0%
3598125 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 53.0 4.74e-01 100.0% 69.3%
3252177 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 54.0 4.23e-01 100.0% 81.8%
3250427 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 52.0 4.16e-01 100.0% 72.7%
858452 4.1.1.476 beta barrels › SH3 › SH3 › SH3 › PF30873 0.63 52.0 4.33e-01 100.0% 51.0%
None 0.63 53.0 3.19e-01 98.0% 53.0%
5037590 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 48.0 4.18e-01 83.7% 88.0%
3328647 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.63 53.0 4.53e-01 100.0% 63.5%
3593222 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 54.0 4.60e-01 100.0% 61.0%
3250883 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 57.0 4.35e-01 100.0% 66.7%
3625817 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.62 51.0 4.52e-01 100.0% 67.5%
4026408 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.62 52.0 4.25e-01 100.0% 53.0%
3730011 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.62 53.0 3.91e-01 100.0% 40.0%
3232582 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.29e-01 100.0% 58.9%
4004517 11.1.1.1138 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29285 0.62 48.0 3.99e-01 83.7% 95.3%
3283745 319.1.1.16 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF26059 0.61 52.0 4.59e-01 98.0% 76.0%
4031509 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 50.0 4.80e-01 100.0% 78.3%
3786396 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.61 53.0 3.95e-01 100.0% 44.6%
4033729 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.61 49.0 4.04e-01 89.8% 97.8%
185635 4.1.1.391 beta barrels › SH3 › SH3 › SH3 › FDF, PF30873 0.60 50.0 3.87e-01 100.0% 40.5%
5016260 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.60 51.0 4.87e-01 100.0% 86.4%
5028741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 47.0 4.69e-01 100.0% 87.3%
3591792 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 49.0 3.63e-01 93.9% 86.2%
3220403 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 51.0 4.07e-01 100.0% 71.4%
4931996 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.59 52.0 3.81e-01 100.0% 37.6%
3492757 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 50.0 4.56e-01 100.0% 75.7%
5043979 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 49.0 4.46e-01 100.0% 77.1%
3436557 220.4.1.8 beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins › ZGRF1-like_N 0.59 52.0 4.52e-01 100.0% 86.7%
4666540 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.59 52.0 4.31e-01 100.0% 58.8%
4381868 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.59 51.0 4.19e-01 100.0% 55.6%
3958896 4187.2.1.0 a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.58 46.0 4.40e-01 100.0% 73.3%
4940896 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.58 49.0 3.41e-01 100.0% 66.9%
3602511 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 45.0 4.23e-01 100.0% 70.0%
5024463 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.57 50.0 3.39e-01 100.0% 27.5%
3339169 4.1.1.415 beta barrels › SH3 › SH3 › SH3 › PNPOx_N 0.57 49.0 4.13e-01 100.0% 57.6%
154312 4.1.1.65 beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.57 46.0 4.21e-01 100.0% 67.1%
4883808 148.1.3.202 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › KOW5_SPT5 0.57 46.0 4.55e-01 95.9% 88.5%
4353877 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.56 49.0 3.97e-01 100.0% 52.6%
3520265 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.56 48.0 3.50e-01 100.0% 61.4%
4619658 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.56 48.0 3.94e-01 100.0% 52.6%
3536857 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.56 46.0 3.22e-01 100.0% 28.5%
4423739 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.55 47.0 3.88e-01 100.0% 52.6%
3258463 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 48.0 4.24e-01 100.0% 72.0%
3175445 633.23.1.9 alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 0.55 49.0 3.14e-01 100.0% 21.8%
3447802 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.54 43.0 3.64e-01 100.0% 50.0%
3879172 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.54 44.0 4.15e-01 100.0% 95.4%
4422252 4.1.1.455 beta barrels › SH3 › SH3 › SH3 › DSRB 0.53 46.0 4.32e-01 100.0% 93.3%
2893010 4.1.1.8 beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.53 42.0 4.20e-01 100.0% 88.9%
4493188 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.53 45.0 3.72e-01 100.0% 52.6%
3308351 73.1.1.0 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.53 45.0 3.55e-01 100.0% 96.4%
3290509 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.53 42.0 3.64e-01 100.0% 73.3%
3712782 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 43.0 3.80e-01 100.0% 62.5%
1878249 11.1.1.256 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PulA_N1 0.52 44.0 3.57e-01 100.0% 49.0%
3387649 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.52 44.0 3.26e-01 100.0% 36.3%
4000280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 44.0 4.26e-01 100.0% 89.1%
3920026 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.51 39.0 2.66e-01 100.0% 21.0%
4026957 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 41.0 3.91e-01 93.9% 76.7%
4982454 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.51 45.0 4.24e-01 100.0% 88.3%
4395961 212.1.1.14 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › CbiD 0.51 43.0 3.03e-01 100.0% 57.6%
3938574 391.1.2.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.50 37.0 3.24e-01 100.0% 52.0%
4670395 212.1.1.14 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › CbiD 0.50 43.0 2.93e-01 98.0% 55.6%