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OK041467.1__UDY80235.1__PAE2_10__00010

Bact-Vir

OK041467.1__UDY80235.1__PAE2_10__00010

Identity

Accession:
OK041467 ↗
Kingdom:
phage

Quality

91.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_PAE2

TaxID: 2884453

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-181
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.76 58.0 6.15e-01 100.0% 89.9%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.72 50.0 5.11e-01 99.3% 71.4%
2w3jA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.71 47.0 4.88e-01 100.0% 71.5%
1guiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 50.0 4.91e-01 99.3% 69.0%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.67 50.0 4.83e-01 100.0% 68.9%
1k42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 49.0 4.68e-01 100.0% 65.5%
1rj8A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.67 53.0 5.52e-01 100.0% 88.6%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.66 51.0 5.36e-01 100.0% 88.6%
2zxqA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.66 50.0 4.90e-01 99.3% 73.0%
4d7yA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.66 50.0 5.28e-01 100.0% 88.5%
2vngA00 2.60.120.1060 Mainly Beta › Sandwich › Jelly Rolls › NPCBM/NEW2 domain 0.65 46.0 4.43e-01 99.3% 63.7%
4ht1T00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 49.0 5.22e-01 100.0% 89.3%
4zchA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 51.0 5.41e-01 100.0% 93.8%
4fffA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.64 57.0 5.66e-01 100.0% 91.5%
1uaiA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 59.0 5.14e-01 100.0% 75.8%
1nc7A00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.64 41.0 4.57e-01 95.9% 81.9%
4jdmA03 2.60.120.1340 Mainly Beta › Sandwich › Jelly Rolls › 0.63 52.0 5.17e-01 100.0% 83.8%
2lrgA00 2.60.60.60 Mainly Beta › Sandwich › Lipoxygenase-1 › 0.63 33.0 3.57e-01 100.0% 57.9%
2xomA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 48.0 4.90e-01 99.3% 82.1%
3a21A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 39.0 4.53e-01 100.0% 91.1%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.62 52.0 5.38e-01 100.0% 94.9%
1vcaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 42.0 4.82e-01 98.6% 95.5%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.60 47.0 3.53e-01 81.1% 91.7%
4kkpA02 2.60.40.3880 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 43.0 4.88e-01 98.6% 97.3%
1stmA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.60 47.0 4.83e-01 99.3% 86.5%
1cd3F00 2.60.169.10 Mainly Beta › Sandwich › Bacteriophage G4 Capsid Proteins Gpf, Gpg, Gpj, subunit 1 › Microviridae F protein 0.60 56.0 3.92e-01 100.0% 92.5%
2o4vA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.59 46.0 3.33e-01 81.1% 56.7%
4agrB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 54.0 5.47e-01 97.3% 100.0%
6mkbA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 52.0 5.09e-01 100.0% 88.7%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.58 42.0 3.30e-01 74.3% 65.1%
4frxA01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.58 43.0 3.12e-01 75.7% 66.2%
3ammA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.58 53.0 4.42e-01 100.0% 82.4%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.58 45.0 3.76e-01 81.8% 86.8%
4b0bB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 44.0 4.20e-01 79.7% 93.5%
3bryA00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.57 43.0 3.16e-01 78.4% 57.3%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.57 46.0 3.94e-01 87.2% 82.2%
5zruA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 43.0 4.30e-01 99.3% 76.3%
2q3zA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 36.0 4.28e-01 98.6% 100.0%
3el6A00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.55 44.0 3.58e-01 83.1% 72.7%
2okxA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 45.0 4.17e-01 97.3% 67.9%
5kkuD00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.55 41.0 3.30e-01 78.4% 53.9%
5dl7A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.54 45.0 3.30e-01 89.2% 99.3%
5jouA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.54 38.0 3.87e-01 96.6% 73.9%
6obtA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.54 44.0 3.58e-01 85.8% 57.8%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.54 46.0 4.32e-01 91.9% 95.5%
1hx6B01 2.70.9.30 Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Viral coat protein p3 0.54 49.0 4.21e-01 100.0% 80.7%
5o16B00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.53 44.0 3.59e-01 87.8% 68.0%
1bt9A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.53 44.0 3.36e-01 88.5% 100.0%
3kvnA02 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.53 43.0 3.40e-01 86.5% 95.1%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.53 38.0 3.89e-01 83.1% 75.5%
2hhiA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.53 39.0 4.28e-01 76.4% 95.8%
1af6A00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.52 39.0 2.81e-01 77.7% 56.5%
3vy8X00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.52 39.0 2.97e-01 78.4% 62.8%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 47.0 3.89e-01 100.0% 60.0%
3l9bA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 40.0 4.34e-01 85.8% 97.6%
1e54A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.51 42.0 3.19e-01 86.5% 100.0%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.50 38.0 2.60e-01 77.7% 25.4%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.50 38.0 2.71e-01 77.7% 36.2%
4npjB02 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.50 43.0 4.38e-01 91.2% 95.8%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3257863 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.77 51.0 5.31e-01 100.0% 71.4%
5039364 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 43.0 5.36e-01 95.3% 100.0%
3941823 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.71 52.0 5.25e-01 100.0% 75.3%
5017302 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 62.0 4.99e-01 100.0% 73.6%
3381013 10.32.1.72 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.66 44.0 4.32e-01 98.6% 61.9%
4509186 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.66 51.0 4.88e-01 99.3% 70.0%
4135739 10.32.1.18 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C 0.66 46.0 4.69e-01 100.0% 72.3%
3307787 207.1.1.43 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 0.66 47.0 3.22e-01 95.9% 21.0%
3535343 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.65 53.0 5.31e-01 100.0% 84.0%
3543731 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.65 52.0 5.15e-01 99.3% 80.5%
5083911 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 53.0 4.98e-01 100.0% 72.5%
4667107 10.3.1.0 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like 0.64 56.0 5.70e-01 100.0% 93.8%
2048183 10.1.1.50 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Dit-like_CBM2 0.64 59.0 5.07e-01 100.0% 75.2%
4874426 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.64 49.0 5.18e-01 100.0% 89.4%
5040078 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 54.0 4.97e-01 100.0% 70.5%
5010985 10.1.1.117 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Thermopsin 0.63 57.0 4.55e-01 98.0% 80.7%
4135567 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.60 47.0 3.40e-01 80.4% 89.5%
3965708 5084.5.4.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.60 40.0 3.38e-01 77.7% 41.7%
4618904 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.58 45.0 3.36e-01 81.1% 89.2%
3980621 5084.5.1.8 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.58 44.0 3.85e-01 78.4% 56.3%
139764 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.58 53.0 4.26e-01 97.3% 91.9%
3804993 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.58 43.0 3.27e-01 76.4% 59.0%
5014956 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 41.0 4.18e-01 100.0% 74.5%
4425267 5084.5.1.6 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprB 0.57 49.0 3.50e-01 90.5% 98.5%
3594654 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.57 45.0 3.33e-01 82.4% 71.4%
4200093 5084.5.1.9 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_O_P 0.57 44.0 3.25e-01 80.4% 55.7%
3969607 5084.1.1.11 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.56 49.0 3.79e-01 92.6% 97.8%
2392665 5084.1.1.12 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Porin_7 0.56 36.0 4.05e-01 81.1% 81.9%
4009884 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.56 50.0 3.94e-01 95.9% 94.1%
3451870 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.56 45.0 3.50e-01 83.8% 100.0%
3979319 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.56 50.0 3.98e-01 95.9% 95.9%
5041444 10.1.2.184 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.56 50.0 4.77e-01 100.0% 82.3%
3611705 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.56 43.0 3.26e-01 81.8% 70.8%
4009646 5084.3.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.56 47.0 3.78e-01 91.2% 68.1%
3975988 5084.3.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.56 47.0 3.92e-01 91.2% 74.6%
3964572 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.56 49.0 3.93e-01 95.9% 89.4%
4522038 11.1.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M 0.55 38.0 4.27e-01 98.6% 93.6%
3803010 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.55 43.0 3.57e-01 81.1% 92.2%
5061418 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 4.36e-01 98.6% 98.2%
3983528 5084.3.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.55 47.0 3.95e-01 92.6% 80.2%
4399548 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.55 46.0 3.43e-01 90.5% 96.0%
3970589 5084.5.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.54 43.0 3.31e-01 83.8% 72.6%
3967388 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.54 49.0 3.83e-01 98.6% 96.8%
4419134 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.54 42.0 3.36e-01 81.1% 61.0%
3875809 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.54 40.0 3.85e-01 83.1% 67.9%
3534691 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.54 40.0 3.85e-01 83.1% 67.9%
3270312 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.54 39.0 3.74e-01 84.5% 63.4%
3964588 5084.5.1.5 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.54 40.0 3.20e-01 78.4% 43.9%
4039744 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.53 47.0 3.69e-01 97.3% 94.8%
382272 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.53 47.0 3.66e-01 95.9% 94.9%
4521584 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.53 47.0 3.67e-01 97.3% 94.7%
3952590 222.1.1.17 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.53 40.0 4.13e-01 77.7% 99.3%
2103480 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.53 46.0 3.65e-01 92.6% 97.9%
4025861 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.53 42.0 3.98e-01 82.4% 72.4%
4606189 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.52 45.0 3.34e-01 92.6% 93.6%
3514719 5084.5.4.6 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › TraF_2 0.52 42.0 3.12e-01 85.1% 68.8%
4341819 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.52 45.0 3.26e-01 93.2% 96.3%
3964265 5084.1.1.43 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Autotransporter 0.52 38.0 3.92e-01 77.0% 84.1%
4256431 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.52 38.0 2.65e-01 77.0% 28.6%
3056279 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.51 39.0 3.76e-01 84.5% 70.6%
4131273 11.1.1.14 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.51 36.0 4.12e-01 98.6% 100.0%
3360262 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.51 40.0 3.67e-01 83.1% 63.2%
4944597 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 37.0 4.12e-01 97.3% 97.4%
3838164 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.50 41.0 3.83e-01 87.2% 99.5%