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OK041467.1__UDY80267.1__PAE2_42__00042

Bact-Vir

OK041467.1__UDY80267.1__PAE2_42__00042

Identity

Accession:
OK041467 ↗
Kingdom:
phage

Quality

73.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_PAE2

TaxID: 2884453

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 58-136
PDB
Domain cluster: rep: OM638088.1__UWJ04760.1__CUB19_gp48__00048__D139-197
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6p10B02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.65 52.0 5.04e-01 87.3% 84.6%
2z4sA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.64 48.0 4.96e-01 84.8% 88.9%
3uk6A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.63 48.0 4.82e-01 87.3% 79.5%
2c9oB03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.62 48.0 4.75e-01 86.1% 79.5%
4egvB01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.60 47.0 3.08e-01 86.1% 60.6%
1af7A01 1.10.155.10 Mainly Alpha › Orthogonal Bundle › Chemotaxis Receptor Methyltransferase Cher; domain 1 › Chemotaxis receptor methyltransferase CheR, N-terminal domain 0.60 43.0 4.33e-01 77.2% 86.3%
2ffjA01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.59 37.0 4.33e-01 75.9% 91.1%
1n69B00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.59 41.0 4.12e-01 89.9% 72.5%
2o8iA00 1.10.3330.10 Mainly Alpha › Orthogonal Bundle › UraD-like › Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase 0.56 45.0 3.64e-01 87.3% 48.7%
2mxdA00 1.10.260.110 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › 0.55 36.0 3.92e-01 94.9% 85.5%
3djbA01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.53 41.0 3.90e-01 84.8% 97.9%
6rftA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 41.0 3.51e-01 88.6% 94.7%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4089409 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 51.0 5.16e-01 84.8% 80.0%
4121495 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 50.0 5.19e-01 84.8% 86.7%
3887909 148.1.3.5 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Pol_alpha_B_N 0.65 50.0 5.12e-01 84.8% 89.3%
4019007 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.61 50.0 4.88e-01 91.1% 83.5%
3929911 148.1.3.210 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_TANC1 0.60 48.0 4.89e-01 93.7% 93.3%
3602256 101.1.2.542 ↗ alpha arrays › HTH › HTH › winged helix domain › ATPase_2 0.60 43.0 4.45e-01 89.9% 80.0%
3300593 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.58 30.0 3.41e-01 77.2% 65.5%
3228982 103.1.1.86 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28543 0.58 41.0 4.25e-01 98.7% 80.0%
3444874 3788.1.1.14 ↗ alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › DUF247 0.56 38.0 3.77e-01 70.9% 95.3%
3604096 2004.1.1.66 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.55 41.0 4.18e-01 86.1% 81.2%
3603655 2004.1.1.66 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.55 42.0 2.90e-01 84.8% 22.4%
1346828 103.5.1.3 ↗ alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › IPMS_D2 0.54 40.0 3.81e-01 81.0% 80.8%
3318298 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.54 32.0 3.41e-01 86.1% 67.7%
4956012 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.54 36.0 3.37e-01 70.9% 68.6%
4988064 4009.1.1.1 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom 0.53 37.0 3.92e-01 74.7% 84.3%
4295236 2004.1.1.516 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD, ResIII 0.53 41.0 2.79e-01 84.8% 63.1%
4633435 2004.1.1.120 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.52 41.0 2.76e-01 84.8% 63.1%
4100242 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.52 41.0 2.79e-01 84.8% 65.3%
5034808 4009.1.1.1 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom 0.51 36.0 3.72e-01 74.7% 84.3%
3486569 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.51 40.0 2.83e-01 84.8% 75.2%