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OK041469.1__UDY80323.1__AXY1_12__00012
Bact-VirOK041469.1__UDY80323.1__AXY1_12__00012
Identity
- Accession:
- OK041469 ↗
- Kingdom:
- phage
Quality
48.3
mean pLDDT
Taxonomy
TaxID: 2884451
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-57
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d7rA01 | 1.10.220.20 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › | 0.78 | 61.0 | 5.33e-01 | 98.1% | 56.1% |
| 2gl2B00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 51.0 | 3.95e-01 | 71.2% | 85.3% |
| 2wwwC01 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.74 | 58.0 | 5.85e-01 | 90.4% | 92.3% |
| 2p67A01 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.72 | 58.0 | 5.84e-01 | 96.2% | 92.3% |
| 5ywwA01 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.69 | 53.0 | 4.07e-01 | 82.7% | 62.6% |
| 4nqwB00 | 1.10.10.1320 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Anti-sigma factor, zinc-finger domain | 0.68 | 58.0 | 5.19e-01 | 100.0% | 68.5% |
| 3sp1A02 | 1.20.120.1910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cysteine-tRNA ligase, C-terminal anti-codon recognition domain | 0.67 | 57.0 | 4.20e-01 | 100.0% | 92.1% |
| 3ix7A00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.65 | 48.0 | 3.61e-01 | 80.8% | 53.4% |
| 4h79A00 | 1.10.520.40 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › CRISPR-associated protein Cse2 | 0.65 | 56.0 | 3.95e-01 | 100.0% | 79.7% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.63 | 43.0 | 4.09e-01 | 71.2% | 59.7% |
| 3nuwA02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.63 | 57.0 | 3.73e-01 | 100.0% | 26.3% |
| 5m9dA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 50.0 | 3.75e-01 | 92.3% | 42.8% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.62 | 44.0 | 3.89e-01 | 76.9% | 70.5% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 43.0 | 4.01e-01 | 75.0% | 64.1% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 48.0 | 4.80e-01 | 92.3% | 86.8% |
| 4l7mA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.60 | 46.0 | 3.11e-01 | 100.0% | 18.8% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 42.0 | 4.05e-01 | 75.0% | 65.0% |
| 3beyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.59 | 47.0 | 4.03e-01 | 100.0% | 52.1% |
| 1x4oA00 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.59 | 48.0 | 4.39e-01 | 100.0% | 75.6% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 47.0 | 3.84e-01 | 92.3% | 87.9% |
| 2aswA00 | 1.10.8.500 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HAMP domain in histidine kinase | 0.57 | 44.0 | 4.36e-01 | 100.0% | 80.4% |
| 3v2lA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.57 | 39.0 | 3.04e-01 | 73.1% | 53.3% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 45.0 | 3.70e-01 | 100.0% | 65.8% |
| 4gytA00 | 1.20.120.740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YgfB uncharacterised protein family PF03695 | 0.56 | 50.0 | 3.41e-01 | 98.1% | 36.7% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 41.0 | 3.56e-01 | 78.8% | 86.9% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.55 | 42.0 | 3.29e-01 | 82.7% | 69.6% |
| 7miqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 45.0 | 3.71e-01 | 100.0% | 70.9% |
| 3c18A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.55 | 45.0 | 3.55e-01 | 96.2% | 98.3% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.55 | 38.0 | 3.60e-01 | 75.0% | 100.0% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.54 | 48.0 | 3.80e-01 | 100.0% | 85.6% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.54 | 44.0 | 3.70e-01 | 100.0% | 81.6% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 37.0 | 3.63e-01 | 92.3% | 66.7% |
| 1cfzA00 | 3.40.50.1450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HybD-like | 0.53 | 44.0 | 3.21e-01 | 98.1% | 40.1% |
| 2zopA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.53 | 43.0 | 3.54e-01 | 100.0% | 97.3% |
| 2hxiB02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 45.0 | 3.33e-01 | 96.2% | 43.3% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.52 | 45.0 | 3.82e-01 | 100.0% | 77.5% |
| 1lfuP00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 44.0 | 3.85e-01 | 100.0% | 65.9% |
| 1x9fD00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 42.0 | 3.24e-01 | 100.0% | 48.6% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 42.0 | 4.35e-01 | 96.2% | 96.0% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 43.0 | 4.03e-01 | 98.1% | 80.3% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3595100 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.68 | 56.0 | 4.61e-01 | 94.2% | 58.0% |
| 5001590 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.67 | 57.0 | 5.65e-01 | 98.1% | 92.7% |
| 3387205 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.67 | 48.0 | 4.03e-01 | 84.6% | 44.4% |
| 3740080 | 109.4.1.548 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120 | 0.67 | 55.0 | 3.57e-01 | 100.0% | 33.9% |
| 3706764 | 109.4.1.226 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CNOT1_TTP_bind | 0.66 | 55.0 | 3.98e-01 | 100.0% | 33.9% |
| 3971032 | 1051.1.1.1 ↗ | alpha superhelices › Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain › Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain › Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain › HOASN | 0.66 | 54.0 | 4.63e-01 | 98.1% | 64.4% |
| 3762595 | 604.7.1.13 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › HR1 | 0.65 | 44.0 | 3.75e-01 | 73.1% | 84.4% |
| 3464273 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.62 | 50.0 | 3.89e-01 | 92.3% | 74.2% |
| 4499345 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 48.0 | 4.91e-01 | 98.1% | 96.0% |
| 143968 | 109.4.1.137 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Type_III_YscG | 0.60 | 48.0 | 4.80e-01 | 92.3% | 86.8% |
| 3559176 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.60 | 52.0 | 4.25e-01 | 100.0% | 82.0% |
| 220107 | 635.1.1.1 ↗ | alpha arrays › YgfB-like › YgfB-like › YgfB-like › UPF0149 | 0.59 | 49.0 | 3.39e-01 | 92.3% | 36.7% |
| 3684428 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.58 | 47.0 | 2.85e-01 | 98.1% | 12.1% |
| 4994951 | 2006.1.4.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 | 0.56 | 46.0 | 3.53e-01 | 96.2% | 44.6% |
| 3942662 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.56 | 48.0 | 4.02e-01 | 100.0% | 98.9% |
| 3282583 | 3663.1.1.1 ↗ | alpha bundles › CRISPR-associated protein Cse2 › CRISPR-associated protein Cse2 › CRISPR-associated protein Cse2 › CRISPR_Cse2 | 0.55 | 43.0 | 3.23e-01 | 100.0% | 55.9% |
| 3453478 | 610.1.1.1 ↗ | alpha arrays › ERP29 C domain-like › ERP29 C domain-like › ERP29 C domain-like › ERp29 | 0.55 | 46.0 | 3.77e-01 | 100.0% | 53.3% |
| 3617454 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.54 | 42.0 | 4.27e-01 | 96.2% | 94.0% |
| 5032990 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.54 | 44.0 | 4.13e-01 | 98.1% | 78.6% |
| 3215866 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 43.0 | 4.29e-01 | 96.2% | 94.5% |
| 1155488 | 632.2.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › GA | 0.51 | 36.0 | 3.49e-01 | 76.9% | 64.5% |
D2
medium
residues 178-263