←Back to structures
OK042081.1__UCS82809.1__vBYenSP400_19__00019
Bact-VirOK042081.1__UCS82809.1__vBYenSP400_19__00019
Identity
- Accession:
- OK042081 ↗
- Kingdom:
- phage
Quality
77.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 21-70
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rrfA00 | 2.30.29.160 | Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal | 0.67 | 56.0 | 4.19e-01 | 100.0% | 65.2% |
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 54.0 | 5.20e-01 | 92.0% | 96.6% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 54.0 | 5.47e-01 | 98.0% | 100.0% |
| 1q1uA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.66 | 54.0 | 4.12e-01 | 100.0% | 97.8% |
| 2p39A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.65 | 53.0 | 3.98e-01 | 98.0% | 90.8% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.64 | 52.0 | 4.19e-01 | 100.0% | 44.2% |
| 3hfnA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 52.0 | 4.99e-01 | 96.0% | 81.7% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 52.0 | 4.07e-01 | 98.0% | 63.7% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 51.0 | 4.83e-01 | 100.0% | 83.3% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.62 | 45.0 | 3.59e-01 | 80.0% | 94.7% |
| 6p2uA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.62 | 41.0 | 4.04e-01 | 86.0% | 65.4% |
| 1xr0B01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 52.0 | 4.39e-01 | 100.0% | 82.4% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 48.0 | 4.02e-01 | 98.0% | 52.0% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 47.0 | 3.79e-01 | 100.0% | 44.0% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.60 | 49.0 | 4.71e-01 | 98.0% | 84.7% |
| 1h12A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.60 | 44.0 | 2.68e-01 | 84.0% | 21.3% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 42.0 | 2.60e-01 | 82.0% | 26.5% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 47.0 | 4.63e-01 | 98.0% | 100.0% |
| 2v3mA00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.57 | 46.0 | 3.85e-01 | 94.0% | 60.6% |
| 6fezA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 46.0 | 3.77e-01 | 92.0% | 96.8% |
| 1n26A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 3.22e-01 | 80.0% | 95.3% |
| 3f1sB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 41.0 | 3.51e-01 | 94.0% | 47.3% |
| 1s4iA00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.54 | 44.0 | 3.24e-01 | 98.0% | 99.3% |
| 5dj7A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 42.0 | 3.42e-01 | 96.0% | 43.5% |
| 2wzpP03 | 2.60.120.880 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 44.0 | 3.42e-01 | 100.0% | 66.9% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 41.0 | 3.73e-01 | 96.0% | 70.9% |
| 7jl1B01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.53 | 42.0 | 3.20e-01 | 100.0% | 74.2% |
| 1faxA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 43.0 | 3.40e-01 | 92.0% | 85.0% |
| 3nqhA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 3.29e-01 | 100.0% | 44.1% |
| 1v5rA00 | 3.30.920.20 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Gas2-like domain | 0.52 | 39.0 | 3.30e-01 | 88.0% | 67.0% |
| 4es8B02 | 2.60.40.3580 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 44.0 | 3.60e-01 | 100.0% | 63.4% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 43.0 | 2.71e-01 | 98.0% | 16.7% |
| 4p0dA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.42e-01 | 100.0% | 47.0% |
| 1pzsA00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.52 | 42.0 | 3.01e-01 | 96.0% | 98.8% |
| 4jklA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 44.0 | 3.62e-01 | 100.0% | 57.9% |
| 2qlvB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.17e-01 | 80.0% | 71.3% |
| 5c71A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.56e-01 | 100.0% | 74.0% |
| 3pvnA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 43.0 | 2.89e-01 | 100.0% | 65.5% |
| 2yocA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 42.0 | 3.40e-01 | 100.0% | 50.9% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5034040 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 58.0 | 5.67e-01 | 100.0% | 94.5% |
| 3294392 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.68 | 61.0 | 5.08e-01 | 100.0% | 60.0% |
| 3330943 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.67 | 58.0 | 5.69e-01 | 98.0% | 90.9% |
| 4011604 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.67 | 55.0 | 4.99e-01 | 100.0% | 77.3% |
| 3597224 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.67 | 55.0 | 4.29e-01 | 100.0% | 73.6% |
| 3541241 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.65 | 58.0 | 5.49e-01 | 100.0% | 85.0% |
| 3604145 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 54.0 | 5.16e-01 | 98.0% | 88.3% |
| 2772566 | 4.11.1.3 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C | 0.65 | 53.0 | 4.27e-01 | 100.0% | 43.9% |
| 2893010 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.63 | 52.0 | 5.15e-01 | 96.0% | 92.6% |
| 3700527 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.62 | 50.0 | 4.15e-01 | 98.0% | 74.3% |
| 3221711 | 221.1.1.112 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ULD_3 | 0.62 | 49.0 | 3.84e-01 | 90.0% | 73.0% |
| 3222051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 52.0 | 4.82e-01 | 98.0% | 73.8% |
| 4009281 | 219.1.1.65 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like | 0.62 | 50.0 | 4.12e-01 | 100.0% | 55.2% |
| 3574784 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 52.0 | 4.14e-01 | 100.0% | 47.3% |
| 5070918 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.61 | 51.0 | 3.96e-01 | 100.0% | 52.5% |
| 4933171 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.60 | 50.0 | 4.03e-01 | 100.0% | 50.9% |
| 5031810 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.60 | 48.0 | 4.39e-01 | 100.0% | 65.3% |
| 3487159 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.60 | 47.0 | 2.91e-01 | 90.0% | 21.4% |
| 2575643 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.60 | 50.0 | 4.61e-01 | 100.0% | 72.5% |
| 3499381 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.59 | 47.0 | 2.67e-01 | 90.0% | 12.3% |
| 3484371 | 220.4.1.0 ↗ | beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins | 0.58 | 46.0 | 3.90e-01 | 90.0% | 82.2% |
| 3983510 | 219.1.1.152 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF26124 | 0.58 | 50.0 | 3.54e-01 | 100.0% | 56.4% |
| 3505030 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.57 | 47.0 | 3.10e-01 | 100.0% | 63.8% |
| 4990333 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.57 | 46.0 | 3.49e-01 | 100.0% | 45.7% |
| 4403870 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.56 | 48.0 | 3.98e-01 | 100.0% | 52.6% |
| 3473808 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.56 | 44.0 | 2.66e-01 | 90.0% | 18.7% |
| 3408736 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.54 | 44.0 | 2.87e-01 | 100.0% | 58.7% |
| 2390466 | 9.1.1.23 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3598_N | 0.53 | 42.0 | 3.08e-01 | 96.0% | 86.0% |
| 3179039 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.53 | 43.0 | 2.63e-01 | 98.0% | 15.1% |
| 3499649 | 220.4.1.0 ↗ | beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins | 0.53 | 40.0 | 3.50e-01 | 90.0% | 74.4% |
| 3630851 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.53 | 44.0 | 2.64e-01 | 98.0% | 14.5% |
| 3323867 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 38.0 | 2.92e-01 | 80.0% | 84.8% |
| 3171545 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.52 | 43.0 | 2.67e-01 | 98.0% | 16.4% |
| 3476221 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.52 | 40.0 | 2.40e-01 | 92.0% | 15.1% |
| 3807424 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.52 | 44.0 | 2.72e-01 | 98.0% | 15.4% |
| 3704678 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.52 | 45.0 | 3.20e-01 | 100.0% | 52.7% |
| 3588234 | 11.1.4.36 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA | 0.51 | 41.0 | 3.34e-01 | 98.0% | 45.0% |
| 1117607 | 10.29.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in distal tail protein (Dit)-like proteins › Jelly-roll domain in distal tail protein (Dit)-like proteins › Dit_C | 0.51 | 40.0 | 3.00e-01 | 100.0% | 52.4% |
| 4322398 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.51 | 43.0 | 3.29e-01 | 100.0% | 46.2% |
| 3752730 | 241.10.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 | 0.51 | 39.0 | 3.20e-01 | 90.0% | 62.9% |
| 3936403 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 3.53e-01 | 100.0% | 82.9% |
| 3413760 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 42.0 | 3.12e-01 | 100.0% | 49.3% |
| 3700772 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.51 | 43.0 | 2.96e-01 | 100.0% | 58.5% |
| 3760665 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.51 | 41.0 | 2.68e-01 | 98.0% | 53.1% |
| 3595628 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 42.0 | 3.40e-01 | 98.0% | 45.7% |
| 5065315 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 3.37e-01 | 100.0% | 61.7% |
| 3924850 | 4.1.1.25 ↗ | beta barrels › SH3 › SH3 › SH3 › PAZ | 0.51 | 34.0 | 2.75e-01 | 72.0% | 51.2% |
| 5055012 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.49e-01 | 100.0% | 67.0% |
| 5038729 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.35e-01 | 98.0% | 61.0% |
| 5062537 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.50 | 41.0 | 3.37e-01 | 98.0% | 92.4% |
| 3715232 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.50 | 43.0 | 3.06e-01 | 100.0% | 81.2% |