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OK042081.1__UCS82842.1__vBYenSP400_52__00052
Bact-VirOK042081.1__UCS82842.1__vBYenSP400_52__00052
Identity
- Accession:
- OK042081 ↗
- Kingdom:
- phage
Quality
77.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-98
Domain cluster:
rep: MG592584.1__AUR95865.1__NVP1214O_16__00016__D6-112
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24085.2 best | DUF7370 | 95.8 | 3.70e-27 | 100.0% | 74.4% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d2eA06 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.65 | 40.0 | 3.74e-01 | 73.4% | 49.6% |
| 1l0oA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.61 | 47.0 | 4.08e-01 | 81.9% | 89.4% |
| 2jx0A00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.60 | 43.0 | 3.81e-01 | 74.5% | 52.7% |
| 4od4A01 | 1.10.357.140 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase | 0.60 | 51.0 | 4.30e-01 | 92.6% | 93.6% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.59 | 39.0 | 3.98e-01 | 84.0% | 68.9% |
| 6m36O01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.59 | 46.0 | 4.56e-01 | 80.9% | 93.8% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 37.0 | 4.08e-01 | 80.9% | 83.1% |
| 4i4cB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 42.0 | 2.82e-01 | 77.7% | 43.5% |
| 3rlbA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.58 | 44.0 | 3.61e-01 | 87.2% | 43.8% |
| 3nrhA00 | 1.20.120.1550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Protein of unknown function DUF5063 | 0.57 | 46.0 | 3.84e-01 | 86.2% | 53.2% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 47.0 | 4.12e-01 | 98.9% | 62.9% |
| 2hqcA01 | 1.20.1640.10 | Mainly Alpha › Up-down Bundle › Multidrug efflux transporter AcrB transmembrane fold › Multidrug efflux transporter AcrB transmembrane domain | 0.55 | 46.0 | 3.64e-01 | 93.6% | 93.6% |
| 5fq4A00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 40.0 | 2.57e-01 | 98.9% | 15.7% |
| 4akvA02 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.53 | 41.0 | 3.37e-01 | 86.2% | 86.8% |
| 6zwwC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 40.0 | 3.32e-01 | 81.9% | 76.3% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.52 | 28.0 | 3.35e-01 | 90.4% | 82.5% |
| 3v0aB02 | 1.20.1120.10 | Mainly Alpha › Up-down Bundle › "Clostridium botulinum neurotoxin B, ""coiled-coil"" domain" › "Clostridium botulinum neurotoxin b, ""coiled-coil"" domain" | 0.51 | 36.0 | 2.48e-01 | 73.4% | 44.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3253944 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.68 | 62.0 | 4.98e-01 | 98.9% | 86.3% |
| 5082894 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.65 | 58.0 | 4.49e-01 | 97.9% | 80.5% |
| 4963777 | 604.12.1.137 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF373 | 0.60 | 47.0 | 4.09e-01 | 86.2% | 61.3% |
| 3302941 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.60 | 53.0 | 4.14e-01 | 100.0% | 71.7% |
| 4523828 | 101.26.1.2 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › HTH_44 | 0.59 | 47.0 | 4.09e-01 | 85.1% | 57.9% |
| 4030787 | 605.1.1.303 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Terminase_4 | 0.58 | 49.0 | 4.84e-01 | 100.0% | 86.0% |
| 3588943 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.58 | 53.0 | 4.84e-01 | 100.0% | 88.3% |
| 4945528 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.57 | 44.0 | 3.48e-01 | 83.0% | 100.0% |
| 4003799 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.56 | 48.0 | 2.90e-01 | 94.7% | 55.4% |
| 4932353 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.56 | 50.0 | 4.06e-01 | 100.0% | 85.6% |
| 3707503 | 101.1.10.20 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB_C_2 | 0.56 | 50.0 | 4.58e-01 | 100.0% | 84.0% |
| 3613353 | 3345.1.1.0 ↗ | alpha arrays › MRG domain › MRG domain › MRG domain | 0.56 | 40.0 | 3.20e-01 | 76.6% | 59.5% |
| 4374787 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.55 | 47.0 | 3.80e-01 | 97.9% | 58.1% |
| 3666876 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.54 | 42.0 | 3.84e-01 | 86.2% | 76.2% |
| 5060556 | 3016.1.1.5 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SHMT | 0.51 | 45.0 | 3.74e-01 | 100.0% | 75.9% |
| 3734336 | 601.14.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › DUF3433 | 0.50 | 39.0 | 3.08e-01 | 86.2% | 78.1% |