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OK085710.1__UAW08013.1__Mx4_p14__00014
Bact-VirOK085710.1__UAW08013.1__Mx4_p14__00014
Identity
- Accession:
- OK085710 ↗
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-82
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21818.4 best | DUF6884 | 36.3 | 8.30e-09 | 87.5% | 48.9% |
CATH (86)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pqmB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 62.0 | 4.46e-01 | 98.8% | 71.2% |
| 2gn0B01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 61.0 | 4.48e-01 | 100.0% | 76.2% |
| 5cvcB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 60.0 | 4.41e-01 | 98.8% | 54.0% |
| 5ybwA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 61.0 | 4.40e-01 | 100.0% | 74.5% |
| 2ox6D00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.69 | 60.0 | 4.77e-01 | 96.2% | 58.4% |
| 4xfjB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 59.0 | 4.69e-01 | 98.8% | 48.0% |
| 5fbhA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 59.0 | 4.51e-01 | 96.2% | 66.3% |
| 8dkrB01 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.68 | 60.0 | 4.32e-01 | 100.0% | 43.7% |
| 4nzpA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.67 | 54.0 | 4.58e-01 | 93.8% | 52.2% |
| 7zvjA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.67 | 57.0 | 4.07e-01 | 96.2% | 77.1% |
| 3obwA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.66 | 52.0 | 4.54e-01 | 88.7% | 56.8% |
| 4ms4A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 57.0 | 4.30e-01 | 96.2% | 67.5% |
| 2jisB02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.66 | 56.0 | 3.90e-01 | 92.5% | 45.2% |
| 4ms4B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 57.0 | 4.38e-01 | 96.2% | 67.8% |
| 1dwoA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.65 | 54.0 | 3.81e-01 | 92.5% | 74.0% |
| 2wk1A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.65 | 56.0 | 4.04e-01 | 98.8% | 88.8% |
| 1qz9A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.65 | 54.0 | 3.79e-01 | 92.5% | 35.2% |
| 2qmaA03 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.65 | 54.0 | 3.83e-01 | 92.5% | 47.2% |
| 4ritA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.64 | 54.0 | 3.88e-01 | 92.5% | 47.5% |
| 5f8vA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.64 | 52.0 | 3.68e-01 | 88.7% | 38.1% |
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.64 | 49.0 | 4.28e-01 | 88.7% | 54.1% |
| 5l8sA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 51.0 | 3.62e-01 | 88.7% | 63.0% |
| 3sdbA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.63 | 55.0 | 4.09e-01 | 95.0% | 67.7% |
| 5k1rA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.63 | 53.0 | 3.76e-01 | 92.5% | 40.2% |
| 4obvA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.63 | 53.0 | 3.77e-01 | 92.5% | 44.5% |
| 3hutA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 54.0 | 4.43e-01 | 96.2% | 79.3% |
| 1z5zB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 51.0 | 4.18e-01 | 91.3% | 86.5% |
| 3om0A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 51.0 | 4.12e-01 | 91.3% | 58.1% |
| 6denA03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.62 | 54.0 | 3.97e-01 | 98.8% | 66.2% |
| 4wzzA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 53.0 | 4.31e-01 | 97.5% | 66.0% |
| 4dg8A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.62 | 51.0 | 3.23e-01 | 90.0% | 21.8% |
| 3rotA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 51.0 | 4.35e-01 | 93.8% | 74.5% |
| 1xg5B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 48.0 | 3.43e-01 | 85.0% | 37.7% |
| 7xexC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 53.0 | 3.98e-01 | 96.2% | 88.6% |
| 1a3cA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 52.0 | 4.15e-01 | 95.0% | 73.5% |
| 3n05A02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.61 | 52.0 | 4.05e-01 | 100.0% | 41.3% |
| 1rrmA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 53.0 | 4.10e-01 | 97.5% | 61.4% |
| 2yogA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 41.0 | 3.10e-01 | 70.0% | 78.7% |
| 4isyA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.61 | 50.0 | 3.59e-01 | 92.5% | 41.3% |
| 2wjwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 50.0 | 4.02e-01 | 92.5% | 75.5% |
| 2h4aA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 50.0 | 4.21e-01 | 92.5% | 66.7% |
| 5by7A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.60 | 48.0 | 4.02e-01 | 88.7% | 49.3% |
| 4pioA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 48.0 | 3.82e-01 | 91.3% | 68.5% |
| 3rkrA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 47.0 | 3.50e-01 | 87.5% | 58.8% |
| 3lf2A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 46.0 | 3.38e-01 | 86.3% | 47.5% |
| 3hjgA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.59 | 50.0 | 3.85e-01 | 98.8% | 88.6% |
| 3mebA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 47.0 | 3.27e-01 | 88.7% | 36.2% |
| 4kigA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 48.0 | 3.80e-01 | 92.5% | 82.6% |
| 1yb2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 48.0 | 3.52e-01 | 92.5% | 47.4% |
| 4uuwA03 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.58 | 42.0 | 3.56e-01 | 78.8% | 51.7% |
| 6qv4A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 48.0 | 3.70e-01 | 93.8% | 78.2% |
| 4yhsA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 47.0 | 4.12e-01 | 91.3% | 77.0% |
| 5znqA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 46.0 | 3.60e-01 | 88.7% | 57.9% |
| 3vaxA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.57 | 47.0 | 3.37e-01 | 93.8% | 37.3% |
| 7pliF02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 47.0 | 3.88e-01 | 92.5% | 90.1% |
| 4ru1A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 46.0 | 3.83e-01 | 91.3% | 61.5% |
| 1ve3A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 49.0 | 3.68e-01 | 98.8% | 82.1% |
| 4g4sP00 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.57 | 47.0 | 3.64e-01 | 93.8% | 41.6% |
| 3c65A00 | 3.30.420.340 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain | 0.57 | 46.0 | 3.89e-01 | 95.0% | 55.6% |
| 3rkuA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 47.0 | 3.38e-01 | 96.2% | 61.2% |
| 3f2iF00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.56 | 48.0 | 3.92e-01 | 100.0% | 75.9% |
| 1v72A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 44.0 | 3.23e-01 | 87.5% | 40.8% |
| 4q6bA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 46.0 | 3.95e-01 | 91.3% | 82.8% |
| 3ntvA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 47.0 | 3.61e-01 | 98.8% | 80.0% |
| 3rc3A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 43.0 | 3.60e-01 | 83.7% | 92.4% |
| 1y0bB01 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 46.0 | 3.61e-01 | 93.8% | 72.7% |
| 4mp8A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 46.0 | 3.70e-01 | 95.0% | 74.0% |
| 4fypB00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 46.0 | 3.44e-01 | 95.0% | 52.0% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 45.0 | 3.64e-01 | 92.5% | 84.2% |
| 2p8jA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 45.0 | 3.41e-01 | 92.5% | 67.0% |
| 5kolD00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.54 | 40.0 | 3.31e-01 | 83.7% | 47.7% |
| 5uj1A01 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 43.0 | 3.64e-01 | 90.0% | 64.8% |
| 4is2A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 44.0 | 3.40e-01 | 96.2% | 72.9% |
| 1iy8A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 45.0 | 3.22e-01 | 95.0% | 62.8% |
| 2hyiC02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 44.0 | 3.59e-01 | 95.0% | 82.0% |
| 1ro7A00 | 3.90.1480.10 | Alpha Beta › Alpha-Beta Complex › sialyltransferase cstii, chain A › Alpha-2,3-sialyltransferase | 0.54 | 46.0 | 3.23e-01 | 95.0% | 42.8% |
| 2z1dA01 | 3.40.50.11750 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HypD, alpha/beta domain 1 | 0.54 | 43.0 | 3.71e-01 | 93.8% | 66.7% |
| 6jh7B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 43.0 | 3.09e-01 | 91.3% | 57.5% |
| 2a3nA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.53 | 43.0 | 3.55e-01 | 93.8% | 74.7% |
| 1xknA00 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.53 | 44.0 | 2.98e-01 | 97.5% | 34.3% |
| 3t4xA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 42.0 | 3.04e-01 | 92.5% | 58.9% |
| 4nesA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 42.0 | 3.49e-01 | 96.2% | 82.2% |
| 3u49D00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 42.0 | 3.12e-01 | 95.0% | 66.1% |
| 4c4aA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 43.0 | 3.63e-01 | 96.2% | 91.7% |
| 5o3zL00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 42.0 | 3.08e-01 | 96.2% | 64.5% |
| 1jayA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 40.0 | 3.07e-01 | 91.3% | 55.2% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3002587 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.68 | 51.0 | 4.42e-01 | 88.7% | 52.9% |
| 3010759 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.67 | 48.0 | 4.00e-01 | 88.7% | 42.4% |
| 4997335 | 7577.1.1.4 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Pyridoxal_deC | 0.66 | 55.0 | 3.54e-01 | 90.0% | 43.2% |
| 1507866 | 2003.1.5.50 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TylF | 0.66 | 46.0 | 5.08e-01 | 73.8% | 95.3% |
| 3856372 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.66 | 58.0 | 4.39e-01 | 97.5% | 70.0% |
| 3280738 | 2007.1.4.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain | 0.65 | 52.0 | 4.89e-01 | 85.0% | 74.7% |
| 4175029 | 7577.1.1.4 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Pyridoxal_deC | 0.65 | 55.0 | 3.48e-01 | 92.5% | 31.4% |
| 4106743 | 7577.1.1.4 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Pyridoxal_deC | 0.65 | 55.0 | 3.56e-01 | 93.8% | 44.9% |
| 3405410 | 2007.1.2.30 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › IR75A_N | 0.64 | 56.0 | 4.27e-01 | 100.0% | 82.1% |
| 3875312 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.64 | 54.0 | 3.89e-01 | 97.5% | 47.8% |
| 3898254 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.63 | 54.0 | 4.20e-01 | 96.2% | 53.3% |
| 3998864 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.62 | 53.0 | 4.56e-01 | 95.0% | 73.8% |
| 3947020 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.62 | 52.0 | 4.44e-01 | 93.8% | 71.9% |
| 1253166 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.62 | 52.0 | 4.50e-01 | 92.5% | 78.4% |
| 5007658 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.62 | 53.0 | 4.48e-01 | 95.0% | 76.3% |
| 4140349 | 7577.1.1.4 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Pyridoxal_deC | 0.61 | 50.0 | 3.16e-01 | 90.0% | 39.3% |
| 3282278 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.61 | 53.0 | 3.75e-01 | 98.8% | 49.6% |
| 5073029 | 327.5.1.9 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding | 0.61 | 52.0 | 3.44e-01 | 98.8% | 33.2% |
| 4217774 | 7516.1.1.3 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2,Glyco_transf_7C | 0.61 | 50.0 | 2.89e-01 | 95.0% | 22.2% |
| 4432146 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.60 | 51.0 | 3.55e-01 | 97.5% | 28.6% |
| 5048385 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.60 | 51.0 | 3.52e-01 | 98.8% | 26.4% |
| 4947506 | 2004.1.1.233 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cas3-like_C_2 | 0.60 | 52.0 | 3.83e-01 | 97.5% | 89.1% |
| 4017920 | 2007.1.14.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › DUF6579 | 0.60 | 49.0 | 4.19e-01 | 93.8% | 100.0% |
| 4599948 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 50.0 | 3.94e-01 | 92.5% | 55.9% |
| 3376506 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.60 | 44.0 | 3.33e-01 | 78.8% | 52.8% |
| 4648784 | 2005.1.1.47 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans | 0.59 | 52.0 | 3.56e-01 | 95.0% | 53.7% |
| 4990034 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.59 | 51.0 | 3.44e-01 | 100.0% | 58.8% |
| 3167619 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.59 | 48.0 | 3.61e-01 | 92.5% | 54.9% |
| 3592500 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.59 | 51.0 | 3.91e-01 | 100.0% | 86.8% |
| 3585883 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.59 | 52.0 | 3.50e-01 | 98.8% | 33.1% |
| 3985686 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.59 | 49.0 | 4.16e-01 | 93.8% | 67.1% |
| 4182115 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.59 | 48.0 | 3.92e-01 | 92.5% | 58.7% |
| 3946392 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.58 | 50.0 | 4.18e-01 | 97.5% | 69.0% |
| 3509845 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.58 | 48.0 | 3.43e-01 | 93.8% | 60.8% |
| 4061833 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.58 | 50.0 | 3.41e-01 | 93.8% | 65.3% |
| 3738899 | 2004.1.1.88 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW | 0.58 | 48.0 | 3.45e-01 | 93.8% | 40.0% |
| 5075445 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 48.0 | 3.22e-01 | 92.5% | 43.6% |
| 3957847 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.58 | 50.0 | 4.26e-01 | 97.5% | 71.9% |
| 4947489 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 49.0 | 3.71e-01 | 98.8% | 81.4% |
| 2514499 | 2003.1.5.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 | 0.58 | 50.0 | 3.45e-01 | 97.5% | 93.6% |
| 3423283 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.58 | 49.0 | 3.44e-01 | 98.8% | 42.9% |
| 4968614 | 2005.1.1.4 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase | 0.58 | 48.0 | 3.58e-01 | 100.0% | 99.2% |
| 3642856 | 2003.1.5.47 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PRMT5 | 0.57 | 43.0 | 4.13e-01 | 81.2% | 86.3% |
| 4386055 | 2005.1.1.47 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase, tRNA_Me_trans | 0.57 | 45.0 | 3.27e-01 | 93.8% | 28.2% |
| None | — | 0.57 | 50.0 | 3.54e-01 | 100.0% | 81.5% | |
| None | — | 0.57 | 46.0 | 3.30e-01 | 93.8% | 28.1% | |
| 4395650 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.57 | 46.0 | 3.32e-01 | 92.5% | 29.6% |
| 4483631 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.57 | 47.0 | 3.31e-01 | 95.0% | 30.0% |
| 3704556 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.57 | 45.0 | 3.15e-01 | 90.0% | 50.5% |
| 5021368 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.56 | 47.0 | 3.17e-01 | 95.0% | 23.4% |
| 3281536 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.56 | 47.0 | 3.78e-01 | 95.0% | 72.9% |
| 3465968 | 2006.1.1.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_phosphat_B | 0.56 | 46.0 | 3.49e-01 | 95.0% | 47.3% |
| 4644409 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.56 | 49.0 | 3.48e-01 | 100.0% | 95.1% |
| 4957756 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.56 | 46.0 | 3.17e-01 | 95.0% | 28.5% |
| 5071227 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.56 | 49.0 | 3.35e-01 | 100.0% | 96.0% |
| 3307219 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.56 | 46.0 | 3.21e-01 | 96.2% | 65.3% |
| 3734640 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.56 | 44.0 | 3.07e-01 | 88.7% | 36.7% |
| 4109641 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.55 | 46.0 | 3.82e-01 | 96.2% | 98.1% |
| 5022630 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.55 | 48.0 | 3.39e-01 | 100.0% | 94.5% |
| 3286968 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 47.0 | 3.39e-01 | 100.0% | 47.3% |
| 3198300 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 47.0 | 3.59e-01 | 98.8% | 64.4% |
| 3728153 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 47.0 | 3.72e-01 | 100.0% | 76.1% |
| 3269584 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 47.0 | 3.37e-01 | 100.0% | 51.9% |
| 2499611 | 2007.1.7.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH | 0.55 | 46.0 | 3.64e-01 | 97.5% | 60.2% |
| 3281466 | 2003.1.5.39 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_19 | 0.55 | 46.0 | 3.30e-01 | 98.8% | 76.2% |
| 3673088 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.55 | 47.0 | 3.77e-01 | 98.8% | 61.8% |
| 3193801 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 46.0 | 3.33e-01 | 98.8% | 51.9% |
| 4989676 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.54 | 46.0 | 3.53e-01 | 95.0% | 53.7% |
| 3899836 | 2006.1.1.41 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › 5-nucleotidase | 0.54 | 47.0 | 3.81e-01 | 97.5% | 64.5% |
| 5060990 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.54 | 44.0 | 3.12e-01 | 93.8% | 27.1% |
| None | — | 0.54 | 46.0 | 3.34e-01 | 100.0% | 98.0% | |
| 3966875 | 7577.1.1.3 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 | 0.54 | 44.0 | 2.99e-01 | 93.8% | 46.9% |
| 3962303 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.54 | 45.0 | 3.92e-01 | 97.5% | 90.4% |
| 4063599 | 2004.1.1.226 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADDB_N | 0.54 | 44.0 | 3.51e-01 | 95.0% | 86.7% |
| 3931016 | 2003.1.7.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B | 0.54 | 44.0 | 3.35e-01 | 95.0% | 75.3% |
| 4575598 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 45.0 | 3.29e-01 | 98.8% | 45.9% |
| 4322077 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.53 | 42.0 | 3.17e-01 | 90.0% | 53.8% |
| 3726503 | 2006.1.1.28 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › APP1_cat | 0.53 | 45.0 | 3.45e-01 | 100.0% | 64.2% |
| 3593298 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 44.0 | 3.29e-01 | 93.8% | 63.2% |
| 3720611 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 45.0 | 3.27e-01 | 98.8% | 54.4% |
| 3262709 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.53 | 44.0 | 3.39e-01 | 97.5% | 91.4% |
| 3210952 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 46.0 | 3.72e-01 | 97.5% | 65.8% |
| 5052466 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 44.0 | 3.17e-01 | 98.8% | 49.3% |
| 4179596 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 43.0 | 3.66e-01 | 93.8% | 91.0% |
| 5073142 | 2484.1.1.94 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C_2 | 0.52 | 41.0 | 2.83e-01 | 88.7% | 92.8% |
| 4385573 | 7591.1.1.1 ↗ | a/b three-layered sandwiches › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › LpxK | 0.51 | 38.0 | 3.63e-01 | 83.7% | 86.0% |
D2
high
residues 88-241
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14072.12 best | DndB | 57.3 | 2.10e-15 | 98.0% | 43.5% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.55 | 29.0 | 2.86e-01 | 88.3% | 44.0% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.53 | 26.0 | 2.55e-01 | 87.7% | 39.1% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5032574 | 876.1.1.9 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB | 0.87 | 83.0 | 7.35e-01 | 98.7% | 88.3% |
| 5031072 | 876.1.1.9 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB | 0.84 | 75.0 | 7.77e-01 | 92.9% | 100.0% |
| 5080912 | 876.1.1.9 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB | 0.84 | 68.0 | 7.44e-01 | 94.2% | 100.0% |
| 3283779 | 876.1.1.9 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB | 0.83 | 69.0 | 7.34e-01 | 85.7% | 100.0% |
| 5076247 | 876.1.1.9 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB | 0.81 | 76.0 | 7.43e-01 | 98.1% | 100.0% |
| 5049804 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.76 | 66.0 | 6.91e-01 | 96.8% | 98.6% |
| 4931651 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.76 | 44.0 | 5.53e-01 | 85.7% | 93.7% |
| 5049279 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.74 | 48.0 | 5.82e-01 | 89.6% | 100.0% |
| 4964030 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.72 | 45.0 | 5.06e-01 | 87.0% | 80.8% |
| 5016948 | 876.1.1.7 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › AIPR | 0.71 | 65.0 | 6.45e-01 | 96.1% | 96.2% |
| 3602844 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.71 | 46.0 | 5.11e-01 | 87.7% | 82.5% |
| 3967199 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 32.0 | 3.89e-01 | 89.0% | 74.3% |
| 4441129 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.56 | 30.0 | 3.38e-01 | 88.3% | 64.2% |
| 4490100 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.52 | 28.0 | 3.06e-01 | 72.7% | 60.8% |
| 5023645 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 23.0 | 3.33e-01 | 85.7% | 100.0% |
D3
medium
residues 242-301
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hiuD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.65 | 45.0 | 3.37e-01 | 73.3% | 92.8% |
| 1t5oA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.62 | 45.0 | 3.44e-01 | 76.7% | 80.9% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 42.0 | 3.13e-01 | 73.3% | 41.1% |
| 3i01A01 | 1.20.1270.30 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 43.0 | 3.17e-01 | 80.0% | 74.6% |
| 3ll7A01 | 1.10.10.1110 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Methyltransferase PG1098, N-terminal domain | 0.58 | 43.0 | 4.15e-01 | 83.3% | 81.9% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 40.0 | 3.42e-01 | 71.7% | 65.0% |
| 5jjxA01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 49.0 | 3.22e-01 | 100.0% | 53.9% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.58 | 41.0 | 3.58e-01 | 76.7% | 58.8% |
| 1tvlA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.56 | 37.0 | 2.33e-01 | 70.0% | 26.4% |
| 1vt0M05 | 6.10.280.90 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 37.0 | 3.54e-01 | 70.0% | 87.8% |
| 4dvgB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.53 | 37.0 | 2.39e-01 | 73.3% | 26.6% |
| 3i2fA02 | 1.10.3020.10 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) | 0.52 | 39.0 | 3.49e-01 | 85.0% | 63.2% |
| 1mwwB00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.51 | 35.0 | 2.83e-01 | 71.7% | 70.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5019279 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.58 | 41.0 | 2.74e-01 | 75.0% | 70.0% |
| 3257298 | 4193.1.1.1 ↗ | alpha arrays › RUN domain › RUN domain › RUN domain › RUN | 0.57 | 41.0 | 2.92e-01 | 78.3% | 33.0% |
| 4157611 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.56 | 41.0 | 2.56e-01 | 81.7% | 13.4% |
| 3875632 | 5054.1.1.63 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, YVC1_C | 0.55 | 46.0 | 2.91e-01 | 100.0% | 80.3% |
| 3282075 | 300.1.1.12 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › DUF5753 | 0.52 | 42.0 | 3.04e-01 | 95.0% | 69.7% |
| 4012143 | 4207.1.1.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) | 0.52 | 39.0 | 3.25e-01 | 83.3% | 58.3% |
| 5028293 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.51 | 43.0 | 2.68e-01 | 98.3% | 62.8% |
D4
medium
residues 338-379_398-435
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k7bA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 32.0 | 3.28e-01 | 98.8% | 59.2% |
| 4ciuA04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 47.0 | 4.48e-01 | 96.2% | 98.9% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 44.0 | 3.17e-01 | 98.8% | 80.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5049805 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 73.0 | 5.43e-01 | 100.0% | 50.3% |
| 3579615 | 103.1.1.3 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N | 0.55 | 41.0 | 4.04e-01 | 93.8% | 76.5% |
| 4551803 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.51 | 34.0 | 3.35e-01 | 88.7% | 63.5% |
| 3775030 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 40.0 | 2.77e-01 | 92.5% | 47.1% |