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OK094665.1__UEP18847.1__vBPaeW3_13__00013
Bact-VirOK094665.1__UEP18847.1__vBPaeW3_13__00013
Identity
- Accession:
- OK094665 ↗
- Kingdom:
- phage
Quality
73.5
mean pLDDT
Taxonomy
TaxID: 2880892
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-61
Domain cluster:
representative
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2uv8A04 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.78 | 45.0 | 2.59e-01 | 100.0% | 6.4% |
| 3iwcB00 | 3.30.360.110 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › S-adenosylmethionine decarboxylase domain | 0.72 | 48.0 | 4.78e-01 | 93.2% | 67.2% |
| 1b7yB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.69 | 51.0 | 4.59e-01 | 96.6% | 55.8% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.67 | 47.0 | 4.01e-01 | 94.9% | 44.9% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.66 | 53.0 | 4.29e-01 | 88.1% | 85.7% |
| 5awwY00 | 1.10.3370.10 | Mainly Alpha › Orthogonal Bundle › Preprotein translocase SecY subunit › SecY subunit domain | 0.65 | 51.0 | 3.11e-01 | 88.1% | 31.1% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 42.0 | 3.31e-01 | 93.2% | 31.0% |
| 5k8mA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 54.0 | 4.24e-01 | 100.0% | 60.3% |
| 1egaA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.63 | 51.0 | 4.26e-01 | 94.9% | 50.9% |
| 3pfoA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 54.0 | 4.24e-01 | 98.3% | 52.3% |
| 4i6yA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.62 | 51.0 | 4.29e-01 | 96.6% | 53.6% |
| 6qdws00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.62 | 54.0 | 4.47e-01 | 98.3% | 86.2% |
| 7oocE01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.62 | 48.0 | 4.35e-01 | 88.1% | 61.2% |
| 5x8tT00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.62 | 53.0 | 4.07e-01 | 100.0% | 49.3% |
| 1zatA01 | 3.10.20.800 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.62 | 53.0 | 4.24e-01 | 100.0% | 63.2% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 50.0 | 4.15e-01 | 91.5% | 86.1% |
| 4dzdA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.61 | 48.0 | 3.89e-01 | 96.6% | 43.9% |
| 3atsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 42.0 | 3.47e-01 | 79.7% | 38.8% |
| 4v19W00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.59 | 47.0 | 3.58e-01 | 96.6% | 60.2% |
| 4h4kA01 | 3.30.70.2940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 42.0 | 3.78e-01 | 88.1% | 52.8% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 4.08e-01 | 96.6% | 60.7% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 3.97e-01 | 86.4% | 69.8% |
| 4ewtA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 48.0 | 3.96e-01 | 100.0% | 55.7% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 39.0 | 3.93e-01 | 91.5% | 71.0% |
| 5dn8A03 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.56 | 38.0 | 3.62e-01 | 81.4% | 57.5% |
| 4q7aC02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 48.0 | 4.00e-01 | 98.3% | 63.0% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 45.0 | 4.24e-01 | 94.9% | 73.6% |
| 3i4hX02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 45.0 | 3.87e-01 | 96.6% | 56.7% |
| 2rb7A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 46.0 | 3.92e-01 | 100.0% | 57.9% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.55 | 40.0 | 3.98e-01 | 91.5% | 78.1% |
| 3viqA00 | 6.10.140.1020 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 44.0 | 3.52e-01 | 91.5% | 51.6% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.54 | 37.0 | 2.75e-01 | 89.8% | 26.1% |
| 2yxdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 38.0 | 2.76e-01 | 76.3% | 40.2% |
| 3pfeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 43.0 | 3.52e-01 | 96.6% | 53.8% |
| 3bzwF00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.53 | 39.0 | 2.73e-01 | 84.7% | 80.7% |
| 2pokA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 43.0 | 3.31e-01 | 100.0% | 69.4% |
| 4o2zA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 41.0 | 3.10e-01 | 86.4% | 49.0% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.53 | 35.0 | 3.62e-01 | 86.4% | 73.2% |
| 3io1A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 43.0 | 3.58e-01 | 98.3% | 49.1% |
| 1gupB01 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.52 | 44.0 | 3.30e-01 | 100.0% | 34.7% |
| 1cg2A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 43.0 | 3.65e-01 | 100.0% | 55.5% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.52 | 44.0 | 3.39e-01 | 98.3% | 70.0% |
| 4af3A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 35.0 | 3.10e-01 | 93.2% | 47.7% |
| 4zg5A00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.51 | 40.0 | 2.76e-01 | 93.2% | 40.5% |
| 6bg2A02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 35.0 | 2.82e-01 | 96.6% | 35.2% |
| 7zgmA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 41.0 | 2.78e-01 | 94.9% | 40.6% |
| 2khxA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 36.0 | 3.32e-01 | 78.0% | 87.3% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1109690 | 5061.1.1.1 ↗ | alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY | 0.73 | 55.0 | 3.29e-01 | 81.4% | 37.2% |
| 3213693 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.73 | 61.0 | 4.79e-01 | 98.3% | 74.1% |
| 3912477 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.73 | 56.0 | 3.54e-01 | 84.7% | 33.4% |
| 4370102 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.72 | 50.0 | 4.53e-01 | 91.5% | 53.8% |
| 3996759 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 57.0 | 4.40e-01 | 96.6% | 39.3% |
| 4029705 | 256.1.1.0 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like | 0.69 | 58.0 | 5.78e-01 | 100.0% | 95.0% |
| 4278285 | 5061.1.1.1 ↗ | alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY | 0.69 | 52.0 | 3.06e-01 | 81.4% | 16.7% |
| 3700769 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.69 | 59.0 | 4.88e-01 | 96.6% | 56.2% |
| 5081005 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.68 | 46.0 | 4.16e-01 | 89.8% | 50.6% |
| 3237694 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 51.0 | 3.90e-01 | 89.8% | 35.7% |
| 3540649 | 11.1.1.789 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › KIAA1549 | 0.66 | 55.0 | 4.47e-01 | 98.3% | 53.3% |
| 5078624 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.66 | 54.0 | 4.55e-01 | 98.3% | 53.3% |
| 3755026 | 206.1.1.51 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PIP49_C | 0.65 | 53.0 | 3.64e-01 | 100.0% | 25.9% |
| 3506556 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.62 | 46.0 | 4.87e-01 | 93.2% | 100.0% |
| 3995788 | 389.4.1.7 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 | 0.62 | 39.0 | 3.97e-01 | 83.1% | 63.3% |
| 4977050 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.61 | 52.0 | 3.78e-01 | 100.0% | 34.9% |
| 3923193 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.61 | 53.0 | 3.33e-01 | 100.0% | 54.4% |
| 4235653 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.59 | 47.0 | 4.25e-01 | 89.8% | 62.4% |
| 3825031 | 11.1.1.1188 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF2854 | 0.59 | 51.0 | 4.15e-01 | 100.0% | 61.7% |
| 3510502 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 49.0 | 4.27e-01 | 96.6% | 77.9% |
| 3585180 | 109.4.1.1316 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf, HAT_PRP39_N, HAT_PRP39_C | 0.59 | 51.0 | 2.91e-01 | 96.6% | 18.1% |
| 5007317 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.59 | 53.0 | 3.35e-01 | 100.0% | 37.9% |
| 5026596 | 327.11.1.7 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_NusA_2nd | 0.59 | 38.0 | 3.90e-01 | 84.7% | 70.9% |
| 3987934 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.58 | 49.0 | 3.98e-01 | 100.0% | 53.3% |
| 5012081 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.58 | 41.0 | 3.81e-01 | 84.7% | 57.5% |
| 4991052 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.58 | 46.0 | 4.13e-01 | 89.8% | 62.4% |
| 3370992 | 304.48.1.21 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C | 0.57 | 48.0 | 2.94e-01 | 98.3% | 66.3% |
| 3513198 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 47.0 | 4.46e-01 | 96.6% | 84.0% |
| 3233196 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.57 | 47.0 | 3.96e-01 | 98.3% | 51.8% |
| 4025731 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.57 | 44.0 | 3.14e-01 | 88.1% | 83.3% |
| 5042689 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.56 | 48.0 | 4.04e-01 | 100.0% | 56.2% |
| 3949953 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.56 | 45.0 | 3.63e-01 | 98.3% | 66.7% |
| 4998601 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.56 | 48.0 | 3.68e-01 | 100.0% | 41.4% |
| 3267804 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 43.0 | 3.61e-01 | 86.4% | 59.0% |
| 3959362 | 101.1.1.531 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › WS_DGAT_cat | 0.54 | 43.0 | 3.21e-01 | 86.4% | 37.3% |
| 5072529 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.54 | 44.0 | 3.99e-01 | 98.3% | 70.0% |
| 3931297 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 40.0 | 3.16e-01 | 84.7% | 45.2% |
| 3930357 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.53 | 38.0 | 2.56e-01 | 96.6% | 20.0% |
| 5019455 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.52 | 39.0 | 2.81e-01 | 83.1% | 64.1% |
| 3990261 | 389.4.1.7 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 | 0.51 | 39.0 | 3.79e-01 | 83.1% | 76.9% |
| 3516360 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.51 | 42.0 | 3.61e-01 | 96.6% | 99.0% |