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OK149171.2__UCR75538.1__vBAfaPQDWS595_54__00054

Bact-Vir

OK149171.2__UCR75538.1__vBAfaPQDWS595_54__00054

Identity

Accession:
OK149171 ↗
Kingdom:
phage

Quality

65.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Schitoviridae› Petruschkyvirus› Alcaligenes_phage_vB_Af_QDWS595

TaxID: 2877946

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-46
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.84 71.0 6.51e-01 95.2% 80.0%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 73.0 6.39e-01 100.0% 79.4%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 69.0 6.24e-01 100.0% 83.1%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 68.0 5.95e-01 100.0% 72.3%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.77 67.0 5.54e-01 100.0% 77.6%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 63.0 5.24e-01 100.0% 70.0%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 60.0 5.28e-01 97.6% 69.7%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.72 63.0 3.76e-01 100.0% 20.1%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 60.0 5.31e-01 95.2% 74.2%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 57.0 5.04e-01 97.6% 69.1%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 61.0 5.13e-01 100.0% 62.7%
4m1xD00 3.30.1360.240 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.71 59.0 5.06e-01 100.0% 93.1%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 54.0 4.63e-01 88.1% 72.9%
4cp6A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.70 57.0 3.30e-01 92.9% 14.6%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.69 55.0 4.15e-01 100.0% 42.7%
2k5iA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.68 56.0 4.66e-01 100.0% 71.4%
2yzyA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.67 51.0 3.54e-01 90.5% 25.2%
3m1uA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.67 55.0 3.76e-01 100.0% 35.7%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.66 52.0 5.04e-01 90.5% 83.3%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 50.0 4.58e-01 88.1% 86.7%
2k3dA00 3.10.450.130 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › folded 79 residue fragment of lin0334 like domains 0.65 54.0 4.40e-01 100.0% 60.9%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 47.0 3.19e-01 81.0% 37.5%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 56.0 3.87e-01 100.0% 38.9%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 48.0 4.29e-01 85.7% 84.4%
1zkpC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.64 53.0 3.33e-01 100.0% 25.7%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 52.0 3.18e-01 100.0% 22.3%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 48.0 3.70e-01 100.0% 38.4%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.62 47.0 4.15e-01 85.7% 60.6%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 48.0 4.57e-01 100.0% 83.9%
5fmgG00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.60 49.0 3.20e-01 100.0% 54.8%
7tzoA01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.59 48.0 3.30e-01 100.0% 95.4%
2k0mA00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 46.0 3.72e-01 100.0% 65.4%
1qqgA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 45.0 3.57e-01 92.9% 49.5%
3g1pA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.59 46.0 3.00e-01 100.0% 25.3%
2a6hC03 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.58 44.0 3.02e-01 90.5% 24.4%
1ryp100 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.57 46.0 3.01e-01 100.0% 54.5%
3d1cA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 43.0 3.32e-01 90.5% 90.4%
1yarH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 44.0 2.89e-01 92.9% 92.1%
3lnbA00 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.52 40.0 2.59e-01 97.6% 25.4%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3251994 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.85 75.0 5.25e-01 100.0% 33.3%
4010317 4.1.1.395 ↗ beta barrels › SH3 › SH3 › SH3 › PF27398 0.84 72.0 6.23e-01 100.0% 63.1%
3660244 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.83 67.0 5.56e-01 90.5% 58.7%
3511278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 72.0 6.12e-01 100.0% 64.3%
3719595 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 65.0 5.76e-01 88.1% 75.0%
3421158 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 68.0 6.06e-01 95.2% 76.7%
3706786 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 70.0 5.85e-01 100.0% 65.3%
3419491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 70.0 6.19e-01 97.6% 85.0%
3839042 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 67.0 6.62e-01 95.2% 93.3%
3713527 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.80 66.0 3.95e-01 95.2% 14.7%
3300051 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.79 68.0 5.68e-01 100.0% 64.0%
4331473 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.79 69.0 5.59e-01 100.0% 53.8%
3660755 4.8.1.21 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor 0.78 66.0 5.46e-01 95.2% 61.3%
3901117 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.78 69.0 4.49e-01 100.0% 25.6%
3793656 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.78 67.0 4.62e-01 100.0% 35.9%
4213135 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.77 66.0 4.77e-01 100.0% 44.4%
4027422 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.77 64.0 5.91e-01 95.2% 78.2%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 65.0 6.01e-01 97.6% 76.4%
3300074 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 63.0 5.87e-01 95.2% 81.5%
3301383 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.76 65.0 6.21e-01 97.6% 90.0%
5002569 284.4.1.0 ↗ a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.76 58.0 5.53e-01 83.3% 72.0%
4998870 4.1.1.483 ↗ beta barrels › SH3 › SH3 › SH3 › RRXRR 0.76 64.0 5.15e-01 97.6% 48.2%
4997767 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 63.0 6.25e-01 100.0% 88.9%
3584571 4.1.1.56 ↗ beta barrels › SH3 › SH3 › SH3 › RBB1NT 0.76 67.0 4.17e-01 100.0% 19.6%
2664854 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.76 64.0 4.91e-01 100.0% 53.9%
1442407 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.76 64.0 4.21e-01 100.0% 30.8%
3590911 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 66.0 5.65e-01 100.0% 64.3%
4998329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 63.0 5.86e-01 97.6% 74.5%
1884741 4.1.1.130 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_19 0.75 64.0 5.81e-01 100.0% 72.9%
2127495 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.75 62.0 4.26e-01 100.0% 35.4%
2641775 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.74 63.0 4.52e-01 100.0% 41.8%
4033299 4.1.1.375 ↗ beta barrels › SH3 › SH3 › SH3 › PF28472 0.74 64.0 5.00e-01 100.0% 45.3%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 63.0 4.60e-01 100.0% 43.3%
4579331 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 64.0 5.66e-01 100.0% 68.3%
3484007 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 59.0 5.09e-01 92.9% 77.1%
3475462 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.74 62.0 5.05e-01 100.0% 58.8%
145285 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.73 61.0 5.41e-01 100.0% 75.8%
3818428 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.73 61.0 5.17e-01 100.0% 69.3%
4995901 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 60.0 5.63e-01 97.6% 74.5%
858452 4.1.1.476 ↗ beta barrels › SH3 › SH3 › SH3 › PF30873 0.72 60.0 4.64e-01 95.2% 49.0%
3423337 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.72 59.0 4.99e-01 100.0% 65.0%
3898952 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 59.0 5.01e-01 97.6% 74.7%
4998726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 58.0 4.88e-01 97.6% 51.2%
3486496 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 60.0 5.60e-01 100.0% 87.3%
5075805 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.37e-01 95.2% 76.4%
3230533 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.55e-01 97.6% 86.7%
4104221 5.1.7.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › BNR, Sortilin-Vps10 0.69 49.0 2.78e-01 76.2% 6.9%
4954529 3335.1.1.0 ↗ beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B 0.69 60.0 5.38e-01 100.0% 70.0%
5000741 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 55.0 4.94e-01 100.0% 80.0%
3529708 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.66 49.0 4.24e-01 88.1% 68.0%
3595807 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 54.0 3.27e-01 100.0% 25.1%
5012319 3794.1.2.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase 0.65 52.0 4.30e-01 95.2% 51.8%
4368811 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.64 51.0 4.73e-01 90.5% 72.7%
3573810 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 42.0 3.09e-01 71.4% 23.6%
3507376 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.62 44.0 4.53e-01 81.0% 80.0%
5034740 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.61 47.0 3.03e-01 95.2% 31.0%
3692073 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.60 45.0 3.98e-01 88.1% 71.4%
3578208 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 44.0 4.20e-01 90.5% 74.5%
3218646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 43.0 3.89e-01 95.2% 56.9%
5058279 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.58 45.0 2.92e-01 97.6% 27.3%
5078949 247.1.1.12 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 0.57 45.0 2.96e-01 100.0% 23.5%
4929797 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.56 41.0 3.83e-01 85.7% 74.6%
3924545 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.55 41.0 3.24e-01 95.2% 56.7%