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OK172329.1__UCR75338.1__vBAfQDWS535_48__00048

Bact-Vir

OK172329.1__UCR75338.1__vBAfQDWS535_48__00048

Identity

Accession:
OK172329 ↗
Kingdom:
phage

Quality

79.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alcaligenes_phage_vB_Af_QDWS535

TaxID: 2877942

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-77
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.71 62.0 5.68e-01 100.0% 75.3%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 55.0 5.85e-01 90.0% 100.0%
2ky9A01 2.30.30.1130 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 5.57e-01 96.7% 92.5%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.62 46.0 4.93e-01 95.0% 98.0%
3soeA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.60 45.0 3.84e-01 81.7% 80.2%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.59 42.0 3.81e-01 76.7% 55.0%
3rbyA01 2.40.128.320 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, N-terminal domain 0.57 47.0 3.64e-01 96.7% 92.0%
2jmbA00 2.40.128.290 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 0.57 47.0 4.32e-01 93.3% 96.2%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.56 44.0 4.07e-01 91.7% 74.7%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 44.0 3.69e-01 93.3% 69.7%
6n90A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.56 40.0 3.54e-01 76.7% 53.4%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 4.21e-01 98.3% 98.0%
6jn7A01 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.55 39.0 2.90e-01 78.3% 71.4%
4bh5A00 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.54 38.0 3.09e-01 76.7% 55.4%
3lf7A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 46.0 2.76e-01 96.7% 86.5%
3a2yA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.53 43.0 3.19e-01 96.7% 44.3%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.53 40.0 3.34e-01 88.3% 85.2%
1ms5B02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 2.74e-01 86.7% 79.8%
2uuqA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.52 39.0 2.45e-01 83.3% 73.9%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.52 38.0 3.89e-01 93.3% 94.4%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 40.0 2.51e-01 86.7% 27.8%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 2.68e-01 96.7% 91.8%
1wlgA02 2.60.98.20 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE 0.50 38.0 3.06e-01 88.3% 85.0%
2lc4A00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.50 36.0 3.09e-01 80.0% 54.1%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3302818 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.70 55.0 5.68e-01 96.7% 92.7%
3616159 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 4.43e-01 100.0% 68.4%
3585474 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 58.0 4.80e-01 100.0% 77.1%
3382832 4.1.1.302 ↗ beta barrels › SH3 › SH3 › SH3 › tSH3-B_UBE2O 0.65 55.0 3.91e-01 95.0% 72.2%
4938919 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 54.0 5.26e-01 98.3% 90.8%
4180096 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.60 42.0 3.72e-01 73.3% 68.2%
3614968 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.60 44.0 3.75e-01 81.7% 83.8%
3708283 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 50.0 4.53e-01 96.7% 90.6%
4961138 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 49.0 4.65e-01 95.0% 78.7%
3925589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 49.0 4.73e-01 95.0% 97.1%
3785320 9.14.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 0.58 48.0 3.63e-01 96.7% 89.4%
184661 9.16.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 › Atu4866 0.57 47.0 4.32e-01 93.3% 96.2%
3742833 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 47.0 2.91e-01 96.7% 86.8%
4120506 243.11.1.4 ↗ a+b two layers › Cystatin-like › NP_346341.1 protein › NP_346341.1 protein › PF29632 0.54 45.0 4.15e-01 93.3% 72.5%
4940665 9.16.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 0.54 45.0 4.12e-01 95.0% 96.3%
3867302 5.1.4.7 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 0.53 42.0 2.61e-01 88.3% 29.3%
3194191 5.1.4.97 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop 0.53 41.0 2.46e-01 88.3% 82.9%
5055961 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.53 42.0 4.00e-01 98.3% 81.2%
3964889 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.52 41.0 3.99e-01 96.7% 81.3%
4976896 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.52 42.0 3.74e-01 96.7% 66.3%
3609648 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 42.0 2.47e-01 90.0% 68.1%
3216882 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 44.0 2.74e-01 96.7% 83.3%
3632420 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 2.71e-01 100.0% 31.1%
3401697 4357.1.1.4 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE_3 0.51 37.0 3.36e-01 80.0% 64.7%
3809374 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 42.0 2.53e-01 96.7% 89.5%
4014785 9.14.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 0.50 39.0 3.02e-01 86.7% 96.6%
3681536 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 41.0 2.49e-01 93.3% 51.1%
3708351 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.50 42.0 2.68e-01 96.7% 87.1%
3198100 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.50 42.0 2.59e-01 96.7% 88.8%
5014142 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 39.0 2.53e-01 95.0% 90.3%
5029643 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.50 40.0 3.78e-01 98.3% 78.8%
3629205 5.1.4.147 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RMC1_N 0.50 39.0 2.46e-01 88.3% 28.1%