OK247671.1UCR75219.1BG3P_5__00005

Bact-Vir

OK247671.1__UCR75219.1__BG3P_5__00005

Identity

90.4 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_vB_CpeS_BG3P

TaxID: 2878264

View cluster (78 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-64_94-217

PDB

Domain cluster: rep: OP172808.1__WAX16238.1__EL753P1_00016__00016__D16-72_146-260

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05133.20 best	SPP1_portal	68.3	9.60e-19	66.7%	28.6%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2e1qC01	3.10.20.30	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain	0.56	24.0	3.40e-01	92.5%	81.5%
4qqgG00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.51	21.0	3.14e-01	95.7%	91.7%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4517008	4.1.1.301 ↗	beta barrels › SH3 › SH3 › SH3 › MJ1316	0.55	25.0	3.62e-01	95.7%	95.0%
3242250	221.1.1.0 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like	0.54	24.0	3.08e-01	94.1%	68.4%
3211699	221.1.1.0 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like	0.51	23.0	2.79e-01	93.0%	63.3%

D2 medium residues 65-93_218-252_288-386

PDB

Domain cluster: rep: OR296439.1__WLZ21167.1__C341T2LP_00021__00021__D62-126_267-290_333-429

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05133.20 best	SPP1_portal	75.2	8.20e-21	61.4%	23.9%
PF05133.20	SPP1_portal	27.5	2.40e-06	25.1%	9.1%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5004294	4038.1.1.0 ↗	alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein	0.79	72.0	5.97e-01	96.9%	87.8%
3442186	3755.4.1.17 ↗	alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Rx_N	0.52	37.0	4.13e-01	73.0%	92.3%
3635408	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.51	36.0	3.86e-01	79.8%	83.6%

D3 medium residues 387-437

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2fgyA01	1.20.120.1310	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain	0.72	48.0	3.81e-01	70.6%	62.6%
3g2bA00	1.10.10.1150	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD)	0.65	47.0	3.89e-01	78.4%	43.3%
4yibA01	1.10.530.10	Mainly Alpha › Orthogonal Bundle › Lysozyme ›	0.59	47.0	3.34e-01	100.0%	28.5%
2v3sA00	3.10.20.90	Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1	0.57	39.0	3.25e-01	70.6%	40.6%
1tjcA00	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.55	37.0	3.05e-01	70.6%	64.2%
8bs9A01	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.52	43.0	2.75e-01	100.0%	82.3%
3s95A02	1.10.510.10	Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1	0.51	40.0	2.87e-01	100.0%	96.0%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4065841	218.1.1.8 ↗	a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA	0.65	43.0	3.49e-01	72.5%	36.8%
3806111	101.7.1.1 ↗	alpha arrays › HTH › DEK-C › DEK-C › DEK_C	0.61	45.0	4.15e-01	78.4%	67.7%
3671225	101.1.17.0 ↗	alpha arrays › HTH › HTH › FF domain	0.56	48.0	3.49e-01	100.0%	77.3%
5046858	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.55	42.0	3.98e-01	88.2%	72.3%
4669178	109.4.1.2072 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29151	0.55	45.0	3.25e-01	98.0%	80.0%