←Back to structures

OK247671.1__UCR75287.1__BG3P_73__00073

Bact-Vir

OK247671.1__UCR75287.1__BG3P_73__00073

Identity

Accession:
OK247671 ↗
Kingdom:
phage

Quality

91.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_vB_CpeS_BG3P

TaxID: 2878264

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-111
PDB
Domain cluster: rep: ON453900.1__WAK79480.1__X__00056__D115-209
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16677.12 best GP3_package 40.6 3.30e-10 100.0% 83.2%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 42.0 4.79e-01 79.2% 78.1%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 41.0 4.64e-01 77.1% 78.1%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 41.0 4.62e-01 77.1% 79.2%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 52.0 5.05e-01 81.2% 77.1%
2jbwA01 1.20.1440.110 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase 0.67 49.0 4.79e-01 96.9% 70.9%
2x64A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.66 49.0 4.61e-01 80.2% 65.5%
4pkwA02 1.10.2030.10 Mainly Alpha › Orthogonal Bundle › Anthrax toxin lethal factor, domain 3, chain A › Anthrax toxin lethal factor, domain 3, chain A 0.65 33.0 3.96e-01 70.8% 73.0%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.65 52.0 4.39e-01 87.5% 73.2%
4gywA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 41.0 3.98e-01 100.0% 57.1%
3nxcA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 54.0 4.43e-01 100.0% 51.4%
3ejbH02 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.62 54.0 4.01e-01 97.9% 88.2%
1h7cA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 47.0 4.63e-01 82.3% 96.1%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.61 50.0 4.80e-01 87.5% 96.3%
3tp3A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 54.0 4.69e-01 100.0% 66.2%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 45.0 4.49e-01 80.2% 91.2%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.60 44.0 4.19e-01 79.2% 87.9%
5nl6B01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 45.0 4.21e-01 81.2% 73.6%
3anwB00 1.20.58.2050 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 53.0 4.43e-01 97.9% 58.6%
2vxgA02 1.10.220.100 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › conserved c-terminal region of ge- 1 0.58 42.0 4.45e-01 100.0% 88.2%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.58 47.0 4.38e-01 86.5% 94.0%
3terA00 1.10.287.3550 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 40.0 3.76e-01 71.9% 68.9%
3rh3A01 1.20.120.930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 0.57 41.0 3.65e-01 84.4% 53.4%
3cf6E03 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.57 49.0 4.48e-01 100.0% 71.0%
4qreA03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.57 50.0 4.14e-01 97.9% 76.9%
1yhlA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.56 49.0 3.37e-01 99.0% 35.1%
3vadA01 1.20.140.20 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain 0.55 47.0 4.08e-01 95.8% 72.4%
2v57A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 43.0 3.63e-01 100.0% 49.1%
4uvmA00 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.54 46.0 2.96e-01 95.8% 20.6%
3u3iA02 1.20.58.1110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 43.0 4.17e-01 86.5% 76.9%
1a17A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 37.0 3.20e-01 100.0% 44.0%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.60e-01 79.2% 77.7%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3702175 101.1.15.0 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.76 42.0 4.52e-01 77.1% 62.4%
3904731 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.73 52.0 5.53e-01 80.2% 83.5%
5056994 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 56.0 4.78e-01 100.0% 52.0%
3484774 622.1.1.1 ↗ alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.71 53.0 5.18e-01 78.1% 74.3%
3669330 604.1.1.148 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TBCC_N 0.70 48.0 5.12e-01 81.2% 80.0%
3697739 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.70 62.0 3.91e-01 100.0% 21.9%
3496310 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.68 52.0 4.81e-01 81.2% 72.5%
3709926 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.68 59.0 5.76e-01 100.0% 87.6%
3809724 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.68 52.0 4.55e-01 81.2% 62.1%
3613251 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 60.0 4.48e-01 100.0% 82.0%
3733465 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.67 59.0 3.86e-01 100.0% 25.0%
3719881 159.1.3.0 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › putative NTP pyrophosphohydrolase Exig_1061 0.66 43.0 4.33e-01 80.2% 66.3%
3673003 3922.1.1.254 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › NET2A_C 0.65 53.0 4.91e-01 88.5% 88.8%
3720469 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.64 56.0 3.50e-01 100.0% 18.1%
3611527 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.64 55.0 4.93e-01 100.0% 68.1%
3411005 5001.1.1.5 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.63 50.0 3.76e-01 85.4% 66.7%
4023064 109.4.1.908 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DOP1 0.63 56.0 4.37e-01 100.0% 49.5%
4934188 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 45.0 4.47e-01 75.0% 82.0%
3716607 109.26.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nucleoporin_C 0.62 56.0 3.30e-01 100.0% 21.1%
3463858 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.62 44.0 4.41e-01 78.1% 72.0%
3828970 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.61 48.0 4.88e-01 85.4% 88.4%
3690029 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.61 49.0 4.05e-01 87.5% 69.7%
3579297 603.3.1.1 ↗ alpha bundles › STAT-like › CAPPD, an extracellular domain of amyloid beta A4 protein › CAPPD, an extracellular domain of amyloid beta A4 protein › APP_E2 0.61 53.0 4.50e-01 99.0% 79.4%
3707839 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 54.0 4.26e-01 100.0% 61.5%
3406938 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.61 52.0 4.17e-01 94.8% 73.7%
4023163 109.4.1.163 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N 0.60 53.0 3.65e-01 99.0% 33.8%
4665460 109.4.1.464 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exportin-T 0.60 52.0 3.85e-01 96.9% 62.4%
4027792 109.4.1.150 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ufd2P_core 0.59 51.0 2.99e-01 97.9% 18.7%
3824114 604.6.1.24 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › DUF6857 0.58 50.0 4.62e-01 100.0% 73.1%
5041914 601.23.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.57 40.0 2.72e-01 71.9% 51.2%
4309318 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.57 47.0 4.64e-01 93.8% 92.4%
3716631 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.56 43.0 2.87e-01 82.3% 22.0%
3598368 6132.1.1.0 ↗ alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain 0.55 48.0 4.01e-01 100.0% 53.9%
3411880 611.3.1.2 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › LEDGF 0.54 45.0 4.01e-01 95.8% 62.1%
3415309 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.53 47.0 3.84e-01 100.0% 71.7%