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OK272470.1__UGL62081.1__JLBYU50_205__00189

Bact-Vir

OK272470.1__UGL62081.1__JLBYU50_205__00189

Identity

Accession:
OK272470 ↗
Kingdom:
phage

Quality

85.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Justusliebigvirus› Escherichia_phage_JLBYU50

TaxID: 2894752

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-73
PDB
Domain cluster: rep: OQ570641.1__WJZ69682.1__YZUL1_32__00031__D3-58
D2 high residues 86-184
PDB
Domain cluster: rep: KJ018209.1__AHK11209.1__S14_100__00097__D18-105
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.77 67.0 5.73e-01 92.9% 98.0%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.65 58.0 5.76e-01 100.0% 93.3%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.62 44.0 3.60e-01 74.7% 56.9%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.61 55.0 5.32e-01 99.0% 91.7%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.61 36.0 4.38e-01 100.0% 98.3%
2uwaA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 3.39e-01 91.9% 78.8%
4agrB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 40.0 3.59e-01 77.8% 75.0%
2erfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 3.50e-01 87.9% 92.3%
4jqtA01 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.55 43.0 3.51e-01 86.9% 97.5%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 42.0 3.74e-01 82.8% 99.3%
1c1fA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 40.0 3.62e-01 76.8% 77.8%
2wkkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 43.0 3.80e-01 87.9% 97.3%
3mazA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 46.0 4.68e-01 97.0% 96.0%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.53 41.0 3.50e-01 82.8% 95.7%
3qv0A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.53 44.0 3.61e-01 89.9% 71.5%
3ligA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.52 42.0 3.61e-01 89.9% 95.9%
3zx7A02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 36.0 3.28e-01 70.7% 82.5%
2wsuB02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.77e-01 89.9% 98.6%
3ap9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 41.0 3.67e-01 89.9% 94.0%
6mzoA01 3.40.50.11970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 43.0 4.01e-01 91.9% 74.6%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.51 35.0 2.87e-01 70.7% 39.3%
5xrkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 41.0 3.74e-01 90.9% 98.6%
1w2tA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.50 41.0 3.74e-01 89.9% 90.3%
7pthC01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.50 43.0 2.87e-01 100.0% 70.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.50 31.0 3.58e-01 100.0% 92.4%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5059099 241.2.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.76 59.0 6.29e-01 99.0% 93.2%
4928574 241.11.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like 0.66 50.0 5.30e-01 82.8% 98.9%
3228484 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.66 40.0 2.95e-01 83.8% 23.5%
223484 241.2.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.65 58.0 5.76e-01 100.0% 93.3%
3965099 241.2.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.63 56.0 5.57e-01 99.0% 92.4%
4269649 241.2.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.62 56.0 5.42e-01 99.0% 90.0%
7384 219.1.1.21 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 0.62 44.0 3.60e-01 74.7% 56.9%
4336238 241.2.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.62 53.0 5.37e-01 96.0% 94.0%
4525958 241.2.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.60 49.0 4.81e-01 88.9% 88.9%
4073461 2484.1.1.12 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase 0.59 46.0 3.72e-01 82.8% 67.9%
3217981 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.58 38.0 3.24e-01 81.8% 38.8%
3237575 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.57 51.0 3.70e-01 100.0% 43.6%
3733997 241.2.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.56 50.0 4.61e-01 97.0% 88.8%
4569026 4041.1.1.1 ↗ a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.56 44.0 3.76e-01 83.8% 83.1%
29947 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.55 41.0 3.68e-01 77.8% 77.8%
3214782 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 39.0 3.66e-01 83.8% 59.2%
3502064 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.54 40.0 3.70e-01 77.8% 78.1%
3221927 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.53 42.0 2.98e-01 83.8% 34.8%
3222413 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 41.0 3.89e-01 83.8% 84.2%
4168024 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.52 36.0 3.27e-01 70.7% 80.7%
1839931 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.52 36.0 3.25e-01 70.7% 79.6%
3996212 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.52 43.0 3.80e-01 91.9% 96.7%
3246494 292.2.1.1 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box 0.51 37.0 2.88e-01 77.8% 83.3%
4247302 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.51 35.0 3.68e-01 77.8% 78.9%
3705308 9.1.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.51 36.0 3.51e-01 74.7% 92.2%
2588563 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.51 41.0 3.70e-01 89.9% 97.9%
4359442 10.1.1.1 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.51 43.0 3.48e-01 96.0% 79.0%
3800817 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 40.0 3.55e-01 85.9% 89.0%
3242234 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.50 37.0 2.37e-01 77.8% 40.2%