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OK272477.1__UGO55794.1__JLBYU43_128__00105

Bact-Vir

OK272477.1__UGO55794.1__JLBYU43_128__00105

Identity

Accession:
OK272477 ↗
Kingdom:
phage

Quality

83.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Demerecviridae› Tequintavirus› Escherichia_phage_JLBYU43

TaxID: 2894751

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-71
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18143.7 best HAD_SAK_2 28.8 2.00e-06 100.0% 34.5%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hx1A02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 37.0 2.92e-01 100.0% 27.0%
3b02A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 40.0 3.53e-01 100.0% 47.1%
1dklB01 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.56 48.0 3.06e-01 100.0% 33.6%
2d8yA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.54 35.0 3.30e-01 79.2% 48.6%
4cvnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 41.0 2.88e-01 100.0% 25.1%
1pp0B00 3.40.198.10 Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like 0.53 42.0 2.97e-01 96.2% 53.1%
1vjrA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 36.0 2.97e-01 100.0% 36.1%
3lfjB00 3.40.35.10 Alpha Beta › 3-Layer(aba) Sandwich › Fructose Permease › Phosphotransferase system, sorbose subfamily IIB component 0.52 41.0 3.11e-01 100.0% 85.5%
2pvuA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 38.0 3.01e-01 86.8% 91.9%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3742908 4075.1.1.2 ↗ a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.62 48.0 3.97e-01 84.9% 100.0%
3268530 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.58 39.0 4.24e-01 79.2% 95.0%
3670166 5051.1.1.6 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans 0.56 46.0 2.77e-01 94.3% 60.4%
None — 0.54 42.0 2.41e-01 94.3% 71.9%
4082146 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.54 35.0 3.63e-01 77.4% 77.8%
4025933 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.54 44.0 3.67e-01 98.1% 65.7%
3897137 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.53 42.0 4.19e-01 88.7% 87.3%
3281252 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 2.69e-01 84.9% 54.5%
141634 7537.1.1.1 ↗ a/b three-layered sandwiches › PTS IIb component › PTS IIb component › PTS IIb component › PTSIIB_sorb 0.52 42.0 3.12e-01 100.0% 86.1%
3744869 109.30.1.6 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin Nup84/Nup107 › Nucleoporin Nup84/Nup107 › Nic96 0.52 41.0 2.49e-01 98.1% 11.8%
4864429 205.1.1.35 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4+Fer4_7 0.51 37.0 3.34e-01 83.0% 96.2%