Back to structures

OK275494.1__UGL62900.1__X__00021

Bact-Vir

OK275494.1__UGL62900.1__X__00021

Identity

Accession:
OK275494 ↗
Kingdom:
phage

Quality

87.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-58
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1m5yC02 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.68 59.0 4.53e-01 100.0% 75.0%
3nrkA02 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.64 53.0 4.37e-01 100.0% 93.6%
3fn2A00 3.30.2200.10 Alpha Beta › 2-Layer Sandwich › histidine kinase doma clostridium symbiosum atcc 14940 › histidine kinase doma clostridium symbiosum atcc 14940 0.58 40.0 3.34e-01 100.0% 41.2%
3rkgA01 2.40.128.330 Mainly Beta › Beta Barrel › Lipocalin › 0.57 46.0 4.04e-01 100.0% 81.9%
6zxbA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.53 46.0 3.41e-01 100.0% 57.6%
1ywxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 36.0 3.12e-01 74.1% 73.9%
2bkkA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 37.0 3.15e-01 98.1% 45.6%
2k2eA01 3.40.1230.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Mth938; Chain: A, › MTH938-like 0.51 38.0 3.05e-01 90.7% 97.8%
3d2wA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.50 41.0 3.77e-01 94.4% 93.1%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4659175 284.1.1.3 a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase 0.71 62.0 4.98e-01 100.0% 92.4%
3935186 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.68 58.0 4.78e-01 100.0% 52.0%
3947018 223.1.1.43 a+b three layers › Profilin-like › sensor domains › sensor domains › CusS 0.54 43.0 3.07e-01 96.3% 51.6%
4287508 241.1.1.3 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT 0.53 35.0 2.78e-01 70.4% 29.2%
3713866 206.1.3.12 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL 0.52 42.0 2.62e-01 100.0% 46.2%
3482975 223.2.1.7 a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.51 37.0 3.00e-01 83.3% 44.8%
3527079 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.50 39.0 3.09e-01 88.9% 56.8%
3783719 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 39.0 3.12e-01 88.9% 47.5%