←Back to structures
OK283306.1__UFK26751.1__X__00071
Bact-VirOK283306.1__UFK26751.1__X__00071
Identity
- Accession:
- OK283306 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Taxonomy
TaxID: 2880885
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-135
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.74 | 47.0 | 5.52e-01 | 87.9% | 90.1% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.69 | 48.0 | 4.22e-01 | 71.7% | 68.0% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.65 | 49.0 | 4.30e-01 | 79.8% | 85.7% |
| 1jllB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.64 | 42.0 | 3.62e-01 | 72.7% | 42.6% |
| 2cayB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 36.0 | 3.35e-01 | 71.7% | 42.0% |
| 1ayeA02 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.63 | 47.0 | 3.32e-01 | 78.8% | 83.4% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 36.0 | 4.19e-01 | 75.8% | 85.1% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.61 | 50.0 | 4.32e-01 | 89.9% | 64.5% |
| 1vwxr00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.60 | 41.0 | 3.82e-01 | 70.7% | 81.6% |
| 1lkxC03 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.60 | 49.0 | 4.80e-01 | 88.9% | 85.0% |
| 4dkkA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 36.0 | 3.98e-01 | 78.8% | 78.4% |
| 1ah5A03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.59 | 38.0 | 4.00e-01 | 75.8% | 73.3% |
| 2cy5A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 33.0 | 3.05e-01 | 77.8% | 43.4% |
| 6ci7A01 | 3.30.160.660 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 35.0 | 3.34e-01 | 78.8% | 50.0% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.56 | 32.0 | 3.52e-01 | 96.0% | 69.5% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 36.0 | 4.07e-01 | 89.9% | 91.5% |
| 3k6kA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 40.0 | 2.87e-01 | 75.8% | 55.6% |
| 3a2eA00 | 3.30.430.20 | Alpha Beta › 2-Layer Sandwich › Killer Toxin P4; Chain A › Gnk2 domain, C-X8-C-X2-C motif | 0.55 | 39.0 | 3.88e-01 | 80.8% | 69.4% |
| 4e11A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 38.0 | 2.77e-01 | 73.7% | 24.0% |
| 5aj3P00 | 3.30.1320.10 | Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 | 0.54 | 36.0 | 3.44e-01 | 71.7% | 57.3% |
| 1y4wA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 38.0 | 2.63e-01 | 73.7% | 32.1% |
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 38.0 | 3.50e-01 | 74.7% | 87.3% |
| 2kouA00 | 3.30.160.380 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Dicer dimerisation domain | 0.53 | 34.0 | 3.46e-01 | 76.8% | 63.7% |
| 3ktnA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 42.0 | 2.96e-01 | 88.9% | 85.6% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 36.0 | 3.65e-01 | 74.7% | 71.7% |
| 4q05A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 40.0 | 2.77e-01 | 80.8% | 70.6% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3736295 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.73 | 37.0 | 2.83e-01 | 91.9% | 22.9% |
| 3592743 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.69 | 43.0 | 4.75e-01 | 74.7% | 77.5% |
| 4947810 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 39.0 | 3.69e-01 | 70.7% | 48.3% |
| 4951932 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.65 | 49.0 | 3.39e-01 | 77.8% | 32.3% |
| 3599949 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.64 | 39.0 | 4.00e-01 | 79.8% | 63.2% |
| 3898198 | 220.1.1.184 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP | 0.64 | 43.0 | 4.00e-01 | 81.8% | 55.2% |
| 5049973 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 47.0 | 4.23e-01 | 78.8% | 100.0% |
| 4200312 | 601.1.2.11 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › CD20 | 0.62 | 44.0 | 3.52e-01 | 72.7% | 80.5% |
| 4524129 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.61 | 44.0 | 4.47e-01 | 74.7% | 76.8% |
| 4945290 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 37.0 | 4.41e-01 | 75.8% | 100.0% |
| 3520951 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 39.0 | 4.08e-01 | 84.8% | 71.1% |
| 3592741 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 38.0 | 4.04e-01 | 80.8% | 74.1% |
| 4151202 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.60 | 44.0 | 3.44e-01 | 77.8% | 39.0% |
| 3998228 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.59 | 37.0 | 3.02e-01 | 83.8% | 33.0% |
| 4986209 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 35.0 | 3.29e-01 | 71.7% | 46.0% |
| 4262943 | 220.1.1.184 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP | 0.59 | 40.0 | 3.78e-01 | 84.8% | 56.8% |
| 4498285 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.58 | 48.0 | 4.89e-01 | 94.9% | 90.5% |
| 3923911 | 896.1.1.3 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 | 0.58 | 33.0 | 3.74e-01 | 72.7% | 72.0% |
| 4592207 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 43.0 | 3.80e-01 | 78.8% | 62.8% |
| 3485537 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.58 | 42.0 | 2.66e-01 | 75.8% | 23.1% |
| 3812094 | 5.1.4.223 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd | 0.57 | 42.0 | 2.83e-01 | 76.8% | 31.2% |
| 4009014 | 223.1.1.35 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 | 0.57 | 49.0 | 3.81e-01 | 92.9% | 90.7% |
| 3941595 | 223.1.1.35 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 | 0.56 | 48.0 | 3.77e-01 | 92.9% | 91.2% |
| 5021851 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.56 | 45.0 | 3.11e-01 | 87.9% | 69.3% |
| 3244569 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.55 | 39.0 | 4.10e-01 | 78.8% | 84.7% |
| 3305160 | 5.1.5.185 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_RIC1_2nd | 0.55 | 41.0 | 2.45e-01 | 78.8% | 15.6% |
| 3308699 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.55 | 38.0 | 3.74e-01 | 77.8% | 66.4% |
| 3317211 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.54 | 39.0 | 3.21e-01 | 75.8% | 72.9% |
| None | — | 0.54 | 40.0 | 2.83e-01 | 77.8% | 72.6% | |
| 4189433 | 223.1.1.81 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Cache_WalK | 0.54 | 47.0 | 3.73e-01 | 96.0% | 97.5% |
| 4026679 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.53 | 43.0 | 3.20e-01 | 88.9% | 34.7% |
| 5027304 | 3926.1.1.1 ↗ | alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D | 0.53 | 46.0 | 3.80e-01 | 93.9% | 70.9% |
| 3780194 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 35.0 | 2.70e-01 | 91.9% | 26.9% |
| 3784907 | 896.1.1.3 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 | 0.52 | 34.0 | 3.67e-01 | 72.7% | 77.6% |
| 1406320 | 896.1.1.3 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 | 0.52 | 32.0 | 3.50e-01 | 76.8% | 74.4% |
| 4216341 | 223.1.1.132 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS, sCache_3_2 | 0.52 | 45.0 | 3.22e-01 | 99.0% | 51.7% |
| 4936581 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.52 | 31.0 | 3.32e-01 | 75.8% | 68.2% |
| 3593905 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.51 | 37.0 | 3.05e-01 | 85.9% | 39.5% |
| 4649171 | 223.2.1.18 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin_2 | 0.51 | 41.0 | 3.49e-01 | 92.9% | 95.1% |
| 3253855 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.51 | 35.0 | 3.70e-01 | 70.7% | 85.9% |
| 3587852 | 223.1.1.33 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_like | 0.50 | 43.0 | 3.58e-01 | 98.0% | 85.4% |