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OK335783.1__UCR81396.1__X__00009

Bact-Vir

OK335783.1__UCR81396.1__X__00009

Identity

Accession:
OK335783 ↗
Kingdom:
phage

Quality

89.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Brevundimonas_phage_BC

TaxID: 2880898

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-80
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ctfA00 3.30.1390.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.69 56.0 5.86e-01 97.3% 98.5%
3n01A00 3.30.70.2470 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein-tyrosine phosphatase receptor IA-2 ectodomain 0.64 52.0 5.04e-01 92.0% 96.6%
1lzwA00 3.30.1390.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS 0.63 54.0 5.17e-01 100.0% 85.7%
1wu7A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.62 49.0 3.40e-01 86.7% 83.8%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 54.0 5.18e-01 100.0% 83.1%
4a1nA02 6.10.250.1250 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.61 39.0 4.51e-01 88.0% 98.0%
3beyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.60 37.0 3.48e-01 77.3% 50.0%
8dqaA01 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.60 51.0 4.69e-01 94.7% 100.0%
2ltuA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.60 40.0 4.38e-01 77.3% 83.9%
3tjmA02 1.10.1470.20 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 0.60 42.0 4.02e-01 74.7% 74.4%
4i3vA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.56 44.0 3.05e-01 86.7% 63.2%
2g8yA01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.54 46.0 4.06e-01 96.0% 99.1%
7w5lA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.53 43.0 3.17e-01 98.7% 78.0%
4nqfA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.53 41.0 3.31e-01 84.0% 68.3%
3trgA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 46.0 4.30e-01 100.0% 84.0%
3lcvB01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.52 30.0 3.38e-01 85.3% 73.7%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 38.0 4.05e-01 78.7% 93.8%
4malA00 1.20.58.2200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 34.0 3.71e-01 81.3% 84.7%
5kkrB02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 37.0 2.94e-01 82.7% 47.0%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4057001 6056.1.1.2 ↗ alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N 0.75 57.0 5.58e-01 80.0% 86.3%
3702846 308.1.1.1 ↗ a+b two layers › ClpS-like › ClpS-related › ClpS-related › Ribosomal_L12 0.73 61.0 6.28e-01 97.3% 98.6%
4162668 308.1.1.1 ↗ a+b two layers › ClpS-like › ClpS-related › ClpS-related › Ribosomal_L12 0.70 58.0 5.50e-01 98.7% 76.4%
4292146 6056.1.1.2 ↗ alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N 0.70 53.0 5.38e-01 81.3% 86.7%
4080972 308.2.1.0 ↗ a+b two layers › ClpS-like › Penicillin binding protein ClpS-like domain › Penicillin binding protein ClpS-like domain 0.69 58.0 5.99e-01 98.7% 100.0%
3839168 308.2.1.0 ↗ a+b two layers › ClpS-like › Penicillin binding protein ClpS-like domain › Penicillin binding protein ClpS-like domain 0.68 59.0 5.55e-01 100.0% 96.8%
4479433 308.1.1.1 ↗ a+b two layers › ClpS-like › ClpS-related › ClpS-related › Ribosomal_L12 0.68 54.0 5.36e-01 97.3% 82.5%
5080185 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.67 38.0 3.73e-01 82.7% 52.5%
4398897 308.1.1.2 ↗ a+b two layers › ClpS-like › ClpS-related › ClpS-related › ClpS 0.67 59.0 5.42e-01 100.0% 79.6%
3288109 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.59 46.0 4.78e-01 93.3% 94.3%
4994814 3110.1.1.0 ↗ a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.59 49.0 3.48e-01 100.0% 69.1%
3178235 308.1.1.0 ↗ a+b two layers › ClpS-like › ClpS-related › ClpS-related 0.58 49.0 4.72e-01 100.0% 86.7%
1032491 101.1.4.4 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT 0.58 44.0 4.04e-01 82.7% 73.3%
3711037 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.57 37.0 3.89e-01 82.7% 71.4%
5023561 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.54 42.0 4.06e-01 90.7% 81.1%
3940761 108.1.1.1 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1 0.53 45.0 4.00e-01 97.3% 85.2%
3972145 5069.1.1.29 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF2214 0.51 39.0 3.21e-01 82.7% 70.3%