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OK349507.1__UFK26978.1__X__00049

Bact-Vir

OK349507.1__UFK26978.1__X__00049

Identity

Accession:
OK349507 ↗
Kingdom:
phage

Quality

79.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 75-125
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f3bA00 2.40.10.370 Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 0.75 66.0 5.01e-01 98.0% 53.9%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.74 59.0 5.12e-01 92.2% 57.0%
2pp6A02 2.40.10.210 Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) 0.73 63.0 5.91e-01 98.0% 77.8%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 52.0 4.73e-01 78.4% 60.9%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 50.0 4.65e-01 78.4% 58.5%
1wxrA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.70 56.0 3.61e-01 98.0% 18.3%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.70 60.0 4.33e-01 98.0% 63.9%
4mmnA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.68 57.0 4.28e-01 100.0% 69.5%
2zbbA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.68 55.0 4.86e-01 96.1% 100.0%
6fu4A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.67 56.0 4.01e-01 98.0% 95.1%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 4.63e-01 78.4% 66.1%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.67 56.0 3.95e-01 96.1% 41.0%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 4.60e-01 78.4% 65.1%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.66 57.0 4.62e-01 100.0% 62.0%
2kcaA00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.65 55.0 4.40e-01 98.0% 55.0%
1twfB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.65 55.0 4.27e-01 100.0% 92.7%
2vxaA00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.62 51.0 4.72e-01 94.1% 81.8%
2onlC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 53.0 4.52e-01 100.0% 77.9%
1blxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 52.0 4.36e-01 100.0% 95.7%
1golA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 52.0 3.97e-01 100.0% 64.8%
7uvpA03 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.60 49.0 3.66e-01 96.1% 71.7%
2v9kA04 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 45.0 3.59e-01 84.3% 95.4%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 41.0 3.68e-01 78.4% 50.7%
1zyoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 48.0 4.24e-01 98.0% 67.5%
2q7aA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 48.0 3.58e-01 100.0% 68.4%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.58 43.0 3.92e-01 100.0% 58.6%
2ej9A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.58 50.0 3.45e-01 100.0% 61.2%
2rfbA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.58 45.0 2.82e-01 92.2% 74.9%
2bolA03 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 50.0 4.14e-01 98.0% 90.3%
2ausC02 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.58 47.0 3.26e-01 94.1% 26.0%
2b9kA00 2.20.20.70 Mainly Beta › Single Sheet › Anthopleurin-A › 0.58 43.0 4.41e-01 94.1% 89.4%
1im8B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 48.0 3.22e-01 100.0% 88.8%
1f0xA04 3.30.1370.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › D-lactate dehydrogenase, cap domain, subdomain 2 0.57 48.0 4.16e-01 100.0% 74.1%
1k3xA01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.57 51.0 3.79e-01 100.0% 77.0%
1g3pA02 3.90.450.1 Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 0.56 46.0 3.78e-01 96.1% 55.8%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 46.0 4.02e-01 98.0% 70.9%
5w7tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 46.0 3.88e-01 98.0% 84.5%
3fn2A00 3.30.2200.10 Alpha Beta › 2-Layer Sandwich › histidine kinase doma clostridium symbiosum atcc 14940 › histidine kinase doma clostridium symbiosum atcc 14940 0.56 48.0 3.93e-01 98.0% 80.4%
2apoA03 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 45.0 3.87e-01 96.1% 65.2%
1fp5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 3.76e-01 98.0% 62.0%
5ajiB03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 45.0 3.77e-01 96.1% 61.1%
4labA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.54 42.0 3.07e-01 98.0% 40.1%
2mn5A00 3.30.30.140 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.53 39.0 3.82e-01 84.3% 87.5%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.53 44.0 3.10e-01 96.1% 63.6%
4v2bA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.35e-01 98.0% 46.2%
2x9aA00 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.51 42.0 4.01e-01 94.1% 82.0%
2w0nA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 41.0 3.32e-01 100.0% 79.7%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.50 38.0 2.95e-01 96.1% 38.4%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943285 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.78 70.0 5.37e-01 98.0% 70.6%
5038876 1.1.13.2 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach 0.78 68.0 5.56e-01 96.1% 76.7%
4669352 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 68.0 5.24e-01 98.0% 54.5%
4883825 1.1.13.20 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 0.76 66.0 5.46e-01 98.0% 69.6%
4260208 1.1.13.62 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 0.75 64.0 5.09e-01 98.0% 64.8%
3416144 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.74 65.0 4.24e-01 98.0% 37.1%
4954563 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 61.0 5.21e-01 94.1% 61.2%
4963049 4.1.1.486 beta barrels › SH3 › SH3 › SH3 › DUF7098 0.73 61.0 5.28e-01 94.1% 62.5%
2642578 1.1.13.3 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.73 63.0 4.94e-01 98.0% 63.6%
4931072 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.72 53.0 4.77e-01 78.4% 60.0%
3961706 4.1.1.161 beta barrels › SH3 › SH3 › SH3 › DUF4178 0.71 52.0 4.82e-01 80.4% 61.5%
4032883 1.1.13.3 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.71 61.0 4.82e-01 98.0% 63.8%
3944430 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 60.0 4.77e-01 98.0% 63.8%
3948467 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.69 50.0 4.63e-01 78.4% 66.2%
4524363 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.68 50.0 4.68e-01 82.4% 63.1%
3511361 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.68 55.0 5.04e-01 94.1% 74.3%
5042402 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.67 56.0 5.40e-01 98.0% 90.0%
3643549 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.67 49.0 4.21e-01 78.4% 52.5%
3792089 325.1.7.2 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 0.67 55.0 4.11e-01 94.1% 91.9%
3948350 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.67 56.0 4.59e-01 98.0% 81.0%
4201878 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.66 49.0 4.57e-01 82.4% 63.1%
5017568 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.66 57.0 4.92e-01 98.0% 66.3%
3970827 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 54.0 4.67e-01 96.1% 81.2%
3952346 1.1.16.1 beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD 0.65 53.0 3.90e-01 94.1% 33.8%
4419948 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 47.0 4.37e-01 78.4% 64.6%
3604610 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 54.0 5.06e-01 98.0% 96.9%
4284764 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 47.0 4.40e-01 78.4% 63.1%
5022644 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 52.0 4.46e-01 100.0% 62.1%
4051625 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 47.0 4.37e-01 82.4% 63.1%
4041586 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.64 47.0 4.37e-01 82.4% 63.1%
5043359 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.63 52.0 4.74e-01 96.1% 100.0%
4938551 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.62 50.0 4.29e-01 94.1% 73.3%
5041953 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 48.0 4.65e-01 92.2% 76.7%
5045027 223.1.1.23 a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 0.61 51.0 3.59e-01 100.0% 58.3%
3390626 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.61 50.0 4.62e-01 96.1% 73.9%
4146937 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 44.0 4.13e-01 84.3% 63.1%
3569505 11.1.1.363 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.60 49.0 4.15e-01 98.0% 60.0%
5058386 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.60 48.0 3.32e-01 92.2% 25.8%
4022662 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 49.0 4.19e-01 94.1% 60.0%
4958890 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.59 49.0 4.25e-01 94.1% 68.8%
3853561 11.1.1.363 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.59 49.0 4.17e-01 98.0% 64.4%
5019301 304.102.1.13 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 0.58 49.0 3.19e-01 96.1% 24.4%
4275176 304.102.1.5 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 0.58 48.0 3.18e-01 94.1% 21.7%
3277088 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 49.0 4.41e-01 98.0% 92.0%
3991838 389.1.1.47 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › TIL_2 0.58 44.0 4.26e-01 94.1% 73.0%
3262859 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.58 47.0 3.28e-01 94.1% 29.2%
3990261 389.4.1.7 few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 0.58 44.0 4.23e-01 94.1% 70.8%
185983 6012.1.1.1 few secondary structure elements › Antimicrobial peptide LCI › Antimicrobial peptide LCI › Antimicrobial peptide LCI › lci 0.58 43.0 4.41e-01 94.1% 89.4%
4025731 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.58 46.0 3.24e-01 96.1% 37.4%
3639132 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.57 45.0 3.37e-01 98.0% 58.8%
3219903 304.9.1.81 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RBD_AKAP-17A 0.57 47.0 3.86e-01 92.2% 61.1%
5001314 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.57 47.0 3.08e-01 94.1% 20.4%
4254304 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.57 43.0 2.85e-01 84.3% 49.8%
4591715 304.102.1.5 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 0.57 48.0 3.16e-01 96.1% 26.0%
3250792 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 47.0 4.45e-01 98.0% 84.6%
4077036 304.102.1.6 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.57 47.0 3.17e-01 96.1% 27.1%
4557453 304.102.1.9 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N, DKCLD, TruB_C_2, Pus10_C 0.57 47.0 3.10e-01 96.1% 24.9%
4197562 304.102.1.6 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.57 41.0 2.73e-01 82.4% 19.2%
3269923 101.1.21.1 alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N 0.57 40.0 2.73e-01 80.4% 51.3%
5033279 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.57 47.0 3.10e-01 96.1% 25.4%
4943359 304.102.1.13 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 0.56 48.0 3.16e-01 98.0% 35.7%
4503008 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.56 43.0 3.00e-01 94.1% 23.5%
3956348 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.56 44.0 3.19e-01 98.0% 40.8%
5056494 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.56 45.0 3.61e-01 98.0% 74.2%
5004647 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.55 39.0 2.60e-01 76.5% 81.3%
5036917 304.102.1.13 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 0.55 44.0 3.33e-01 98.0% 60.0%
4473668 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.55 45.0 3.20e-01 94.1% 31.2%
3232202 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 3.16e-01 100.0% 60.0%
5031633 304.8.1.118 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › TruB_C_2 0.51 38.0 2.82e-01 84.3% 58.7%
3506274 331.2.1.7 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM1_C_vert_fung 0.50 41.0 3.20e-01 96.1% 55.2%