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OK483199.1__UFD98214.1__S1R3X_000006__00006
Bact-VirOK483199.1__UFD98214.1__S1R3X_000006__00006
Identity
- Accession:
- OK483199 ↗
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-71
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4n81A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.66 | 54.0 | 4.35e-01 | 93.8% | 81.6% |
| 2gmhA03 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 44.0 | 3.91e-01 | 89.2% | 49.0% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.62 | 36.0 | 3.38e-01 | 76.9% | 45.6% |
| 3c1yA01 | 3.40.1700.10 | Alpha Beta › 3-Layer(aba) Sandwich › YojJ-like (1 › DNA integrity scanning protein, DisA, N-terminal domain | 0.59 | 47.0 | 3.82e-01 | 92.3% | 98.6% |
| 3vx8A02 | 3.40.140.70 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 N-terminal domain | 0.57 | 46.0 | 3.54e-01 | 92.3% | 52.4% |
| 6inxA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.57 | 36.0 | 3.63e-01 | 87.7% | 63.1% |
| 2gnxA02 | 3.30.450.240 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.57 | 42.0 | 3.57e-01 | 81.5% | 47.7% |
| 4msxA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 38.0 | 2.51e-01 | 70.8% | 18.2% |
| 4o9dA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 44.0 | 2.69e-01 | 100.0% | 14.1% |
| 1goiA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.55 | 41.0 | 3.77e-01 | 100.0% | 60.0% |
| 2hqyA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 42.0 | 3.48e-01 | 92.3% | 44.6% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 39.0 | 3.52e-01 | 83.1% | 54.9% |
| 3k6kA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 46.0 | 3.02e-01 | 96.9% | 48.8% |
| 1owqA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.54 | 36.0 | 3.59e-01 | 92.3% | 66.2% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 46.0 | 3.01e-01 | 96.9% | 24.8% |
| 4by6D02 | 1.25.40.800 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 42.0 | 3.00e-01 | 92.3% | 41.3% |
| 8b55A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 40.0 | 2.90e-01 | 100.0% | 29.6% |
| 4a0tA01 | 6.20.80.10 | Special › Other non-globular › Glycosyl hydrolase fold › | 0.53 | 35.0 | 3.64e-01 | 70.8% | 80.3% |
| 3arxA03 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 40.0 | 3.74e-01 | 90.8% | 66.3% |
| 6bu2A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 40.0 | 3.12e-01 | 87.7% | 70.7% |
| 1y9lA00 | 2.40.128.230 | Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM | 0.51 | 40.0 | 3.50e-01 | 90.8% | 88.2% |
| 6htnA01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.51 | 36.0 | 2.86e-01 | 75.4% | 59.1% |
| 3upsA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 42.0 | 3.72e-01 | 100.0% | 78.7% |
| 3rmuA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 39.0 | 3.23e-01 | 89.2% | 79.9% |
| 6ll8A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.51 | 40.0 | 3.38e-01 | 90.8% | 78.3% |
| 1q47A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 42.0 | 2.60e-01 | 100.0% | 89.7% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4019840 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.64 | 55.0 | 4.59e-01 | 100.0% | 77.5% |
| 3621099 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 39.0 | 3.31e-01 | 100.0% | 39.0% |
| 3806412 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.64 | 45.0 | 2.75e-01 | 95.4% | 12.5% |
| 3369483 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.63 | 48.0 | 3.18e-01 | 96.9% | 20.8% |
| 3217385 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 48.0 | 4.45e-01 | 83.1% | 65.9% |
| 4184400 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.61 | 45.0 | 3.75e-01 | 83.1% | 93.8% |
| 3655450 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.60 | 38.0 | 2.26e-01 | 89.2% | 8.6% |
| 5036626 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.59 | 43.0 | 2.60e-01 | 76.9% | 14.6% |
| 3958560 | 4279.1.1.1 ↗ | a+b three layers › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DisA nucleotide-binding domain › DAC | 0.59 | 40.0 | 3.66e-01 | 70.8% | 97.6% |
| 4955147 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.57 | 47.0 | 3.00e-01 | 93.8% | 18.3% |
| 3245878 | 59.1.4.1 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N | 0.57 | 38.0 | 2.78e-01 | 95.4% | 25.0% |
| 4603150 | 316.1.1.26 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › SMODS | 0.57 | 48.0 | 3.57e-01 | 100.0% | 57.4% |
| 3739180 | 59.1.1.5 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Dcc1 | 0.57 | 36.0 | 3.32e-01 | 100.0% | 49.4% |
| 3660342 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.57 | 47.0 | 2.95e-01 | 98.5% | 78.8% |
| 3340500 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.56 | 47.0 | 3.00e-01 | 90.8% | 26.3% |
| 4408335 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.56 | 44.0 | 3.51e-01 | 90.8% | 47.3% |
| 3936775 | 59.1.4.1 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N | 0.56 | 38.0 | 2.87e-01 | 95.4% | 27.6% |
| 1684841 | 241.13.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › SopD | 0.56 | 43.0 | 3.98e-01 | 95.4% | 64.7% |
| 4940325 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.56 | 46.0 | 4.76e-01 | 96.9% | 100.0% |
| 4127691 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.56 | 45.0 | 3.84e-01 | 92.3% | 52.2% |
| 3715372 | 6110.1.1.1 ↗ | alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 | 0.56 | 46.0 | 2.98e-01 | 93.8% | 52.8% |
| 4449615 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.55 | 44.0 | 4.00e-01 | 89.2% | 73.3% |
| 3960379 | 286.1.1.0 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like | 0.54 | 43.0 | 3.95e-01 | 90.8% | 80.0% |
| 3503177 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 38.0 | 2.32e-01 | 75.4% | 12.1% |
| 5052214 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 44.0 | 3.58e-01 | 90.8% | 98.4% |
| 3701084 | 316.1.1.14 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD | 0.54 | 45.0 | 3.33e-01 | 98.5% | 55.6% |
| 3307861 | 5.1.8.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › WD40 | 0.53 | 39.0 | 3.08e-01 | 100.0% | 37.8% |
| None | — | 0.53 | 35.0 | 2.89e-01 | 73.8% | 35.8% | |
| 4406214 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.53 | 43.0 | 3.83e-01 | 89.2% | 68.8% |
| 4379527 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.52 | 42.0 | 3.88e-01 | 89.2% | 76.5% |
| 4040812 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.52 | 45.0 | 4.05e-01 | 95.4% | 78.7% |
| 3604222 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.52 | 39.0 | 3.38e-01 | 84.6% | 49.1% |
| 5076987 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.52 | 38.0 | 2.55e-01 | 83.1% | 22.9% |
| 3585331 | 5.1.5.114 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NWD2_C | 0.52 | 38.0 | 2.54e-01 | 100.0% | 20.4% |
| 3497279 | 59.1.4.0 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 | 0.52 | 36.0 | 2.81e-01 | 100.0% | 31.6% |
| 4989408 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.51 | 35.0 | 3.24e-01 | 72.3% | 67.4% |
| 4453444 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.51 | 35.0 | 3.38e-01 | 70.8% | 80.0% |
| 2388540 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 32.0 | 2.37e-01 | 87.7% | 20.6% |
| 3516108 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.51 | 41.0 | 2.67e-01 | 100.0% | 43.3% |
| 4286824 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.51 | 42.0 | 3.92e-01 | 100.0% | 76.7% |
| 5041912 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.51 | 40.0 | 2.58e-01 | 90.8% | 20.6% |
| 3290823 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.50 | 42.0 | 4.05e-01 | 96.9% | 97.3% |
| 4029617 | 5.1.11.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DUF7899 | 0.50 | 41.0 | 2.52e-01 | 93.8% | 89.3% |
| 3996653 | 5.1.4.377 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_TULP_N | 0.50 | 39.0 | 2.54e-01 | 100.0% | 16.8% |