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OK499971.1__UGO47227.1__COBRASIX_62__00060

Bact-Vir

OK499971.1__UGO47227.1__COBRASIX_62__00060

Identity

Accession:
OK499971 ↗
Kingdom:
phage

Quality

93.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cobrasixvirus› Enterobacter_phage_vB_EclS_CobraSix

TaxID: 2894794

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-82
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 58.0 4.71e-01 100.0% 40.6%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 54.0 4.88e-01 100.0% 51.0%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 53.0 5.75e-01 100.0% 80.6%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 52.0 6.10e-01 98.6% 100.0%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 55.0 5.53e-01 100.0% 72.4%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 48.0 4.57e-01 100.0% 56.5%
2budA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 52.0 4.79e-01 100.0% 59.8%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 56.0 5.68e-01 100.0% 84.7%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.71 57.0 5.98e-01 98.6% 92.6%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 51.0 5.25e-01 97.3% 80.0%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.70 52.0 3.80e-01 100.0% 29.6%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 52.0 5.27e-01 100.0% 80.6%
2db9A01 3.90.70.200 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain 0.70 55.0 4.46e-01 100.0% 46.6%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 44.0 5.01e-01 78.4% 87.3%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 51.0 5.16e-01 100.0% 80.6%
2b2tC00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 51.0 4.89e-01 81.1% 90.7%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.79e-01 100.0% 80.3%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 49.0 4.94e-01 100.0% 77.3%
2k3yA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 56.0 4.82e-01 100.0% 77.4%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 52.0 4.56e-01 100.0% 63.5%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.56 39.0 3.82e-01 100.0% 67.1%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 47.0 4.19e-01 93.2% 80.4%
2hq7B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 49.0 3.86e-01 94.6% 76.8%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.55 48.0 4.01e-01 98.6% 93.9%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 45.0 4.11e-01 93.2% 78.8%
1wqsA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 44.0 4.02e-01 93.2% 88.3%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 45.0 4.06e-01 93.2% 74.0%
1vq8B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 43.0 3.56e-01 100.0% 48.2%
3ef2A02 3.30.460.70 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.53 35.0 2.96e-01 100.0% 37.0%
2dy7A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 41.0 4.00e-01 83.8% 84.0%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 44.0 3.21e-01 95.9% 68.2%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 44.0 3.26e-01 95.9% 71.7%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3304627 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.80 51.0 5.79e-01 100.0% 87.3%
3821920 4.1.1.283 ↗ beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2 0.79 51.0 5.85e-01 100.0% 89.1%
3713334 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.79 55.0 6.02e-01 98.6% 90.0%
1567496 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.78 52.0 5.86e-01 100.0% 89.5%
3936726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 51.0 5.73e-01 98.6% 89.1%
4549698 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.76 57.0 5.27e-01 100.0% 62.1%
3913782 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 54.0 5.75e-01 100.0% 87.5%
3484700 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.74 55.0 4.94e-01 100.0% 58.0%
3550699 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.73 56.0 5.18e-01 100.0% 64.2%
3939175 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.72 56.0 4.40e-01 100.0% 41.3%
3254941 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.72 56.0 4.61e-01 100.0% 47.7%
3940233 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 55.0 4.73e-01 100.0% 54.5%
3498558 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.71 56.0 4.36e-01 100.0% 41.3%
3559960 2006.1.6.66 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF4537 0.71 50.0 5.17e-01 100.0% 78.6%
3738161 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.71 56.0 4.61e-01 100.0% 49.6%
3174427 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.70 57.0 4.39e-01 100.0% 41.3%
3390533 4.8.1.19 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › WAC_Acf1_DNA_bd 0.70 56.0 4.27e-01 100.0% 39.4%
3329012 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.69 56.0 4.33e-01 100.0% 41.3%
4419948 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.67 46.0 4.86e-01 98.6% 80.0%
3774692 4.1.1.31 ↗ beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.67 50.0 4.95e-01 100.0% 73.8%
3636320 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 60.0 4.31e-01 100.0% 47.0%
3826141 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 55.0 5.15e-01 100.0% 75.6%
3358748 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.64 53.0 5.20e-01 100.0% 82.5%
3322460 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.64 53.0 4.56e-01 100.0% 57.4%
3650296 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.64 53.0 4.87e-01 100.0% 69.5%
3218545 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.64 57.0 5.50e-01 100.0% 91.8%
3703449 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 53.0 5.33e-01 100.0% 89.3%
2866962 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.63 48.0 4.19e-01 100.0% 55.6%
3693741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 51.0 5.33e-01 100.0% 92.8%
3090683 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.62 56.0 4.88e-01 100.0% 67.6%
4470603 4.1.1.217 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.62 56.0 4.26e-01 100.0% 51.5%
3830352 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.61 51.0 4.91e-01 100.0% 78.8%
3175156 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 49.0 5.01e-01 100.0% 90.0%
3585474 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 53.0 4.67e-01 100.0% 66.7%
3784405 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.60 55.0 4.57e-01 100.0% 74.4%
3587906 4.1.1.46 ↗ beta barrels › SH3 › SH3 › SH3 › VEG 0.60 44.0 4.33e-01 100.0% 72.5%
4295399 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.60 54.0 4.91e-01 100.0% 81.0%
3489170 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.60 55.0 5.16e-01 100.0% 84.4%
3731692 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 55.0 4.51e-01 100.0% 63.1%
4012379 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.59 46.0 3.89e-01 82.4% 52.2%
3183093 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 52.0 4.12e-01 100.0% 50.0%
3616159 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 53.0 4.13e-01 100.0% 61.3%
3476615 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 51.0 4.97e-01 100.0% 87.5%
3468015 219.1.1.25 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT 0.58 42.0 3.30e-01 100.0% 36.8%
4028467 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.57 48.0 3.24e-01 93.2% 29.5%
3929839 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 52.0 4.23e-01 100.0% 60.0%
3990002 802.1.1.0 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.57 48.0 4.62e-01 94.6% 85.9%
4625374 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.55 46.0 3.26e-01 93.2% 37.0%
3599465 4.18.1.0 ↗ beta barrels › SH3 › Plus3 › Plus3 0.55 48.0 3.87e-01 100.0% 50.7%
4647114 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.55 45.0 3.22e-01 93.2% 35.4%
3816593 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.55 45.0 3.27e-01 93.2% 38.6%
3704929 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.54 47.0 3.74e-01 100.0% 47.3%
3988859 1.1.7.91 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 0.54 43.0 3.91e-01 100.0% 62.9%
4234560 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.53 47.0 3.87e-01 100.0% 74.1%
3713569 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 47.0 3.88e-01 100.0% 56.2%