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OK499983.1__UGO47783.1__MCCARTNEY_209__00195

Bact-Vir

OK499983.1__UGO47783.1__MCCARTNEY_209__00195

Identity

Accession:
OK499983 ↗
Kingdom:
phage

Quality

68.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-59
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3prbA02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.74 55.0 6.07e-01 85.5% 100.0%
3laeA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.73 56.0 4.99e-01 85.5% 97.5%
2d3aA01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.69 58.0 4.85e-01 98.2% 78.2%
2p4pA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.69 53.0 4.66e-01 85.5% 83.3%
3kw2A01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.68 55.0 5.11e-01 87.3% 79.4%
2pliA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.68 52.0 4.57e-01 85.5% 92.9%
2oaiA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.67 51.0 4.55e-01 83.6% 92.5%
2nqwA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.67 50.0 4.39e-01 83.6% 95.4%
3frnA03 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.65 51.0 5.26e-01 98.2% 96.1%
4ad9A01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.64 44.0 3.04e-01 72.7% 60.8%
3ddcB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 53.0 4.04e-01 94.5% 75.2%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.63 54.0 4.60e-01 98.2% 58.9%
2pp6A02 2.40.10.210 Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) 0.63 57.0 5.44e-01 100.0% 90.5%
2ekiA00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.62 53.0 4.55e-01 100.0% 84.9%
1xm8A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.62 44.0 2.86e-01 74.5% 43.7%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.62 52.0 4.62e-01 98.2% 88.0%
3kbgA01 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.60 50.0 4.48e-01 96.4% 86.4%
1j0gA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 48.0 4.17e-01 96.4% 83.7%
1we6A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 47.0 3.98e-01 100.0% 74.8%
2c7hA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 47.0 4.23e-01 98.2% 88.4%
1ef5A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 46.0 4.10e-01 96.4% 96.6%
1wspA00 2.40.240.130 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › 0.57 46.0 4.17e-01 98.2% 97.6%
2kkcA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 46.0 3.99e-01 100.0% 100.0%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.56 45.0 3.53e-01 100.0% 67.1%
1mhxA00 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 45.0 4.39e-01 96.4% 89.2%
2shpB03 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.56 39.0 2.57e-01 76.4% 19.8%
2qa1A02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 41.0 3.79e-01 85.5% 97.5%
5g5tA02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 40.0 2.89e-01 87.3% 80.9%
2bhvB01 2.40.128.260 Mainly Beta › Beta Barrel › Lipocalin › Type IV secretion system, VirB10/TraB/TrbI 0.54 44.0 3.32e-01 100.0% 72.7%
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.54 34.0 2.92e-01 100.0% 34.7%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.54 41.0 4.15e-01 94.5% 92.9%
3a27A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 38.0 2.61e-01 78.2% 69.9%
3wx7A02 2.10.10.90 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › 0.53 48.0 3.94e-01 100.0% 78.9%
2exdA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 47.0 4.24e-01 100.0% 83.8%
1vjnA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.50 36.0 2.52e-01 76.4% 39.7%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 37.0 3.72e-01 87.3% 95.0%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3802388 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.86 76.0 6.60e-01 98.2% 80.7%
4997767 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 48.0 5.24e-01 94.5% 68.9%
3289363 239.1.1.7 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.84 71.0 6.88e-01 92.7% 88.3%
4956395 239.1.1.7 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.83 70.0 7.01e-01 92.7% 96.4%
4934433 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.81 71.0 7.13e-01 96.4% 100.0%
5035867 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.81 71.0 7.14e-01 96.4% 100.0%
3960335 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.81 70.0 6.43e-01 94.5% 80.0%
5042815 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.80 69.0 6.11e-01 96.4% 87.5%
5041150 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.80 70.0 6.46e-01 96.4% 98.6%
4936305 375.1.1.332 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › WH_Lhr 0.80 68.0 6.82e-01 92.7% 96.4%
4950422 239.1.1.7 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.80 70.0 6.82e-01 96.4% 91.7%
4169889 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.79 69.0 6.40e-01 98.2% 97.1%
4968500 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.78 67.0 6.47e-01 96.4% 85.7%
5015989 239.1.1.7 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.77 64.0 6.42e-01 92.7% 94.5%
5041151 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.76 65.0 6.03e-01 94.5% 98.6%
5047208 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.76 57.0 5.79e-01 80.0% 87.3%
4956032 239.1.1.7 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.76 65.0 6.37e-01 96.4% 88.3%
4962605 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.76 66.0 5.54e-01 98.2% 88.4%
4992034 239.1.1.7 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.75 64.0 6.46e-01 96.4% 98.2%
4959950 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.75 66.0 5.73e-01 98.2% 87.1%
4950806 4.6.1.8 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › WH_Lhr 0.75 64.0 6.44e-01 96.4% 96.4%
4964644 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.75 63.0 6.39e-01 96.4% 98.2%
4928950 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.74 56.0 5.87e-01 80.0% 94.0%
4951496 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.74 64.0 5.59e-01 98.2% 87.1%
5064404 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.73 51.0 5.04e-01 83.6% 68.3%
4933883 284.4.1.1 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain › FKBP26_IF 0.73 54.0 5.65e-01 85.5% 88.0%
4935174 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.73 55.0 5.95e-01 80.0% 100.0%
5071089 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.73 58.0 6.09e-01 90.9% 96.0%
4927420 239.5.1.1 beta barrels › Ribosomal protein L25-like › 40S ribosomal protein S3A N-terminal domain › 40S ribosomal protein S3A N-terminal domain › Ribosomal_S3Ae 0.71 60.0 5.25e-01 98.2% 88.2%
4241370 217.2.1.1 a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC 0.70 51.0 4.57e-01 80.0% 98.8%
3543844 221.1.1.46 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg 0.70 60.0 5.01e-01 100.0% 91.0%
4026053 64.3.1.0 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.69 44.0 5.08e-01 94.5% 90.0%
4426924 239.1.1.6 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 0.69 59.0 5.34e-01 100.0% 80.8%
3476726 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.69 59.0 4.97e-01 98.2% 92.6%
3507373 391.1.1.7 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.67 43.0 3.82e-01 92.7% 48.0%
4398943 217.2.1.1 a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC 0.66 51.0 4.65e-01 85.5% 89.3%
3515805 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.65 42.0 4.77e-01 90.9% 90.0%
3999534 391.1.2.9 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 0.64 42.0 4.75e-01 90.9% 92.5%
4854958 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.64 54.0 4.50e-01 98.2% 54.2%
3973553 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 54.0 4.99e-01 98.2% 74.3%
4074370 217.2.1.1 a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC 0.63 48.0 4.35e-01 85.5% 86.3%
3507376 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.63 40.0 4.59e-01 90.9% 90.0%
3489398 221.1.1.16 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › TGS 0.63 53.0 4.67e-01 100.0% 87.5%
4235474 4237.1.1.1 beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.63 54.0 3.93e-01 100.0% 65.2%
3519410 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.62 40.0 4.60e-01 90.9% 92.3%
5020796 221.1.1.16 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › TGS 0.62 53.0 4.76e-01 100.0% 98.7%
3907194 221.1.1.170 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBL_ZFAND1 0.62 53.0 4.12e-01 100.0% 71.5%
4027791 221.1.1.5 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DIX 0.61 50.0 4.46e-01 98.2% 98.8%
3264170 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.60 50.0 3.05e-01 98.2% 19.8%
3584992 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.59 42.0 2.85e-01 76.4% 24.9%
3591210 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 42.0 3.68e-01 78.2% 91.1%
3935869 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.58 39.0 3.91e-01 92.7% 65.5%
3605971 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 47.0 3.91e-01 98.2% 99.1%
3745675 221.1.1.4 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 0.57 46.0 3.91e-01 100.0% 90.0%
3792873 391.1.2.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.55 37.0 4.09e-01 90.9% 97.5%
3925839 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.52 39.0 2.50e-01 83.6% 19.4%
5063003 4.1.1.120 beta barrels › SH3 › SH3 › SH3 › SH3_16 0.52 39.0 3.75e-01 87.3% 88.6%
3792780 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.52 33.0 3.70e-01 90.9% 90.0%
3510113 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.52 35.0 3.76e-01 90.9% 88.9%
390 2.1.1.19 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD 0.51 47.0 4.28e-01 100.0% 86.1%
3619860 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.51 34.0 3.76e-01 90.9% 92.5%